Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 196 6e-45 >seq4 Length=5450249 Score = 196 bits (216), Expect = 6e-45 Identities = 1120/1766 (63%), Gaps = 60/1766 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || || |||||||| || ||||| | || | |||||| | || | ||||||||||| Sbjct 1505909 CGAAGATAGTACATACCAGTCTTTAAACCTTTCTTCCATGAGTAGAAATGCATTGAGGTG 1505850 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | || | | ||||| | ||||| | || | |||||| |||||||||||| Sbjct 1505849 AGTTTAGCAAAGGTTGGTTCAGCAATGAAAACATTGAAACTTTGACTTTGATCGATGAAA 1505790 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCT 115736 || ||||| || |||||||| || | | | ||| | ||||||||| || ||| | Sbjct 1505789 GCACCACGATCAGCAGCCATATCGATGAGAGTTCTTTGACG-GATTTCCCAAACTGTTTT 1505731 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 ||||| | || | |||||| ||||| | |||| ||| || || |||| ||| Sbjct 1505730 ATAGAGTTCTTTCAAATCATCAGGGATGCCACCGATGGATTGAATGGAACCACGTGCAGC 1505671 Query 115797 GACCATGAGATCCTTCATATCCTTTGACCAGA-GACCAATCTTCTTGAGATCCTCCACGA 115855 || || ||| |||||| || |||||| | | ||||| | | ||||||| || | | Sbjct 1505670 AACGATTTGATTCTTCATCTCTGGTGACCAAATGCCCAAT-TCCATGAGATCTTCGAGTA 1505612 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 || || ||||||| || ||||| || | || | || ||||||| | Sbjct 1505611 ATTGTTTGTTGACAATTGTGAATTCACCTGCTAAAACACGACGACTGTAAATGTTGGAAG 1505552 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| || |||||||| ||||||||||| | |||||| ||| || || || ||||| | Sbjct 1505551 TGTAAGGTTCAAAGCATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCATTG 1505492 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCT----AATGCGTTCCTTGAGGGC- 116030 |||| ||||| || || || | | |||||| | |||| ||||| || | Sbjct 1505491 GTGCAATGAGGAGTGAATTACGTA-AACCACCCTTATTGACAATGTTATCCTTTAGCTCT 1505433 Query 116031 GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 | || | || | || ||| || | | | |||||||||||| ||||||||||||| Sbjct 1505432 GCCCAATTCCAACGAGAACTTGGTGT-AACATTCCACATATCAAATTGGAGGATACCTTT 1505374 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC-GGAGC 116149 ||| ||||| || || | || | ||||| | || ||| ||||||||| ||| Sbjct 1505373 GGAAGCTGGTGAACCTTTGAAAGATTCATAGGTACCATCACGGATCGCCAATTCATGAG- 1505315 Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209 || | || || || || || || || | |||| | | ||| Sbjct 1505314 AGGCAGTCAAAGCGGCAAAGTAAATGGTTTCGGCGATTTCAACATTTAATTTAGCGGCGG 1505255 Query 116210 CGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269 | | ||| || | | ||| ||| || ||||| || | |||||| | ||| | Sbjct 1505254 CAACACTATCGAAAGGCATACGCATTTTAATGAAAACATCGGCCAAACCTTGAATACCAA 1505195 Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCC 116329 |||||||| |||||||| | ||| || || ||| |||| |||||| | || | Sbjct 1505194 TACCAATTGGACGATGTCTAAGATTTGAAGTTTTAGCCTCAGCCACTGGATAATAGTTAC 1505135 Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA---------TGAA 116380 |||||| | || ||||| ||| | | ||||||||||||| ||| Sbjct 1505134 GATCGATGATAACGTTAAGATTGACGGTTATTAACTTTGTGATTTCAAATAGGAATTGAT 1505075 Query 116381 G--------CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG----ACATACTTAGGAA 116428 | ||||| | | | ||| || | ||| ||| |||| |||| Sbjct 1505074 GGTCAAACTCTTTTTCTTTTGGATCGGTTGAGCCTACTTTTTGACGAACAAACTTTGGAA 1505015 Query 116429 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATT 116487 | || || || || |||||||| || | | | |||| || | | ||||| | || || Sbjct 1505014 GTGCTATAGAGGCAAGATTACAAACGGCGATTTCAT-CTGGTGATGTGTATTGAATGATC 1504956 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || ||||| | ||| ||| ||||||| || || ||||||||||| || || | ||| Sbjct 1504955 TCGGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTTAGCATTA 1504896 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || ||||||||||| | || |||| || || || || ||| |||| | ||| || Sbjct 1504895 CAGGCATCCTTGTACAAAATGAATGGAGTACCAGTTTCAACTTGAGACTCCATAATGGCG 1504836 Query 116608 TTCCATACATCGGCGGC-----TGGCACAGTGGCGTTGGCTCGCCCCTCCT-CCTCGTAC 116661 ||| | || || || ||| | | | || | | | | ||||| Sbjct 1504835 AACCAAAGTTCTTGAGCTTTAATGACAC---GTCTTGGGAGGTCAGGTGTTGCTTCGTAT 1504779 Query 116662 TTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCT 116721 || ||||| || | || || || || | || |||||||| | || | Sbjct 1504778 TTCAAATAGAGAGCACGATGTTCCTCTGAGTGAGTTTCAGCAAGACCTGGTGCTTCATTT 1504719 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 ||||| ||||| | ||| | ||| | || || || | ||| || | || | | Sbjct 1504718 GGACAAAAGAGGGCCCAATCGCCATTTTGTTCGACACGTTCCATAAAAATATCACTAACC 1504659 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 || || || |||| ||||| | | | ||||| | || || | Sbjct 1504658 CAAAGAGCATAGAATAGATCTCTAGCTCTCATCTCTTCCTTACCAGTGTTTTTCTTTAGA 1504599 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 || | ||| || | || ||| |||||||| ||||||| ||| || || | | ||||| Sbjct 1504598 TCAATAAATTCAAAGACATCAGCGTGCCATGGTTCCAAGTAAACGGCAAAGGCACCCTTT 1504539 Query 116902 C---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 | | |||| | || | || || | || || | || || || ||||||||||| Sbjct 1504538 CTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCATTGGC 1504479 Query 116959 ATGATACCATCAGATTG-GCCATTTGTCCCCCGAATACGAGACTTGTTG--GCTCTGACA 117015 | | ||||| | ||| ||||| || || |||||| |||| | || | || | Sbjct 1504478 ACCAAACCAT-TGCTTGTACCATTGGTACCACGAATA--TAACTTTGAGCAGCAC-GA-A 1504424 Query 117016 TCGT-GGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 || | || ||| ||||||||||| || || | |||||| || |||| || | | | Sbjct 1504423 TCTTATGAACTGCAATACCAATACCACCGGCACTCTTTGAAATGAGTGCACATTGTTTCA 1504364 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGAAGCAGCTCGAC 117132 | || | || || |||||||| || || |||| ||||| | | ||| || ||| Sbjct 1504363 AAGTGTCATAAATACCATCGATTGAATCCTCCTTCATTTG-AACCAAGAAACAAGATGAC 1504305 Query 117133 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192 |||||||| ||||||||| |||||||| || |||||||| || || |||||| Sbjct 1504304 ATTTGTGGTGATGGTGTACCTGCGTTGAATAGAGTTGGTGTGGCATGAGTGAACAATTTC 1504245 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 | |||| | |||||| | | | |||| | |||||| || || ||||| || Sbjct 1504244 TCAGACAAACGTTTGTAGGTGTTGATGGCAGATTCGAGGTCTTCGCCATGGATACCAATG 1504185 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 ||||| ||||| ||||||| ||| || Sbjct 1504184 GAGACACGCATCAACATGTGTTGTGG 1504159 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/201 (72%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 12792 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCG---CG 12848 || |||||||| ||| ||| | |||||| | || | |||||||||||||||| | Sbjct 1752722 AAACCATCCATTTCAACCAACAATTGATTTAATGTATTCTCACGTTCATCATTCGAACCA 1752781 Query 12849 GGCATACCACCCGCACTGCGTTGCT-TACCGACGGCGTCAATTTCGTCAATGAAAACGAT 12907 | | |||||| || | ||||| |||| || || |||||||| || ||||| || || Sbjct 1752782 GAGAAACCACCTTTACCTC-TTGCTCTACCAACTGCATCAATTTCATCGATGAATACAAT 1752840 Query 12908 ACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTC-TCTTGGCACCGACAC 12966 ||| ||| ||| | | || |||||| | ||||| || | | ||| ||| |||| Sbjct 1752841 ACATGGTGCATTCTTTCTAGCCTGTTCAAATAGATCTCTAACACGTGATGG-ACCAACAC 1752899 Query 12967 CCACAAACATCTCCACAAAAT 12987 | ||||||||||| || |||| Sbjct 1752900 CAACAAACATCTCTACGAAAT 1752920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506885577560