Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 5e-11 >seq3 Length=6357299 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || || || ||||| || |||| || ||| || ||||||||||| || || Sbjct 5878551 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCCTTTTGAATGTTATAATCTGAG 5878610 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || | ||||| |||||||| |||| || ||| || ||| | || Sbjct 5878611 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCTGGTGGA 5878670 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || ||||| ||| || | | || ||| | ||||| Sbjct 5878671 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATGTTATCAGAACCTTCAACT 5878730 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || ||||| || |||||||| || |||||||| |||||| Sbjct 5878731 TCTAAAGTGATTGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCATA 5878778 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || || || ||||| ||||| | ||| ||| || |||||||||||||| ||| Sbjct 5879235 CCACCTCTTAATCTTAAAACTAAGTGGAGAGTGGATTCCTTTTGAATGTTATAGTCGGAA 5879294 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || | ||||| || || || || || ||||| || ||| | || Sbjct 5879295 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGA 5879354 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || ||||| ||| || | | || ||| | ||||| Sbjct 5879355 ATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTCAATGTTATCAGAACCTTCAACT 5879414 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| || || |||||||| || ||||| || |||||| Sbjct 5879415 TCTAAAGTGATGGTCTTACCAGTGAGAGTTTTAACAAAAATTTGCATA 5879462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633437784648