Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 >seq1 Length=4923596 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 19385 GGGCTGCTCAAGATACTATGCCATTAGACTGGTCTTTACCTTTGGCCAAAGAACTT--AC 19442 |||| || ||| || |||||| | || ||| | || || ||||| ||||| || | Sbjct 1440769 GGGCAGCACAACCAACAATGCCACTTGATTGGGCATTGCCATTGGCAAAAGACATTCAAG 1440710 Query 19443 TTTATCCGGTAAAGAGACAATTATTTCATTTGGTGGAGCAAGTAACCCAGATATTTCATA 19502 || |||||| | || ||||||||||||| ||| ||| | |||||| || | Sbjct 1440709 AGAAT--GGTAAAAAAGTTATAGTTTCATTTGGTGGTGCATCTAATCAAGATATCTCTTG 1440652 Query 19503 TAAATTTTCCATTGATGAATTGGTTCAAACTTACCTTGATGTGAT-AGAATTATATAATC 19561 || |||||| |||| |||||| || | ||||| | ||| | | ||| |||||| Sbjct 1440651 TAGATTTTCAGTTGAAGAATTGATTGAGACTTATAATACCGTGGTCACTATT-TATAATG 1440593 Query 19562 CATCTGGATTAGATTTTGATTTAGAAAAT 19590 ||| ||||||||||||||||||||| ||| Sbjct 1440592 CATATGGATTAGATTTTGATTTAGAGAAT 1440564 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19268 GGCAACATTATCCCAACGGCAGACCAAATTATTTATATTCCAAACAAGCTGTTGAATGGA 19327 ||||| | ||||| | || ||||||||| | ||||| ||||||||| |||| | | Sbjct 1441050 GGCAAAACTATCCAAGTGGAAGACCAAATCCAATTTATTCAAAACAAGCTATTGACTATA 1440991 Query 19328 ATGCTGATGGTTTAGTATTTGGATTTATTACATTATCTGCT 19368 ||| | ||||||||||||||| || |||||||||||| || Sbjct 1440990 ATGTTTTTGGTTTAGTATTTGGCTTCATTACATTATCTTCT 1440950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658402862568360