Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 161 5e-35 >seq4 Length=5450249 Score = 161 bits (178), Expect = 5e-35 Identities = 326/475 (69%), Gaps = 14/475 (3%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||||| || | |||||| ||||||| || || |||||||| | ||| Sbjct 1504722 ATTTGGACAAAAGAGGGCCCAATCGCCATTTTGTTCGACACGTTCCATAAAAATATCACT 1504663 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTT 26006 || ||| | ||||| |||| |||||| |||||||| ||||| || || ||| || || | Sbjct 1504662 AACCCAAAGAGCATAGAATAGATCTCTAGCTCTCATCTCTTCCTTACCAGTGTTT-TTCT 1504604 Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 ||||||| | || ||||| | ||| | |||||||||||| || || | ||||| || Sbjct 1504603 TTAGATCAATAAATTCAAAGACATCAGCGTGCCATGGTTCCAAGTAAACGGCAAAGGCAC 1504544 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 | ||||| || || ||||||||||| ||||| | ||||| ||||||||||| | || Sbjct 1504543 CCTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCA 1504484 Query 26127 TTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAAT----CTTGGATCCTGTCGA 26181 |||| || || ||| ||| | || || || | | |||| ||| || | | Sbjct 1504483 TTGGCACCAAACCA-TTGCTTGTACCATTGGTACCACGAATATAACTTTGA----GCAGC 1504429 Query 26182 TCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC 26241 | ||| | ||| | |||||| || ||||| || | |||||||| |||||| | Sbjct 1504428 ACGAATCTTATGAACTGCAATACCAATACCACCGGCACTCTTTGAAATGAGTGCACATTG 1504369 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGA 26301 | | || || |||| || | || ||| | |||||| | || |||||||| Sbjct 1504368 TTTCAAAGTGTCATAAATACCATCGATTGAATCCTCCTTCATTTGAACCAAGAAACAAGA 1504309 Query 26302 AGATAATTGCGAATGA-GTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 || | ||| | ||| | ||| |||| || |||| || ||||| |||||||| Sbjct 1504308 TGACATTTGTG-GTGATGGTGTACCTGCGTTGAATAGAGTTGGTGTGGCATGAGT 1504255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039873559075