Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq4 244 1e-59 >seq4 Length=5450249 Score = 244 bits (270), Expect = 1e-59 Identities = 403/573 (70%), Gaps = 14/573 (2%) Strand=Plus/Plus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTT---CCTGTGGCAATAACAAAATCA 47808 |||| |||||||| | ||| || |||| || || || ||||||||||| ||||| Sbjct 2062193 GATTTTTCAACAAATTCACGAACTGAAT---GAGTTTCACCAGTGGCAATAACGAAATCT 2062249 Query 47809 TCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCC 47868 || || | |||||||| | |||||||||||| || || || |||||||| || || ||| Sbjct 2062250 TCTGGCTTCTCTTGTTGTAACATTAACCACATTGCTTCAACGTAATCTCTAGCGTGACCC 2062309 Query 47869 CAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATT 47928 || ||||| || | | ||| || | || | | || | |||| || | | Sbjct 2062310 CAATCACGTTTAGCGTTGATATTACCCAAGTAGAGAATTTCATCTCTACCA-CATGCAAT 2062368 Query 47929 GCTTTTAATGCT-CTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTC 47987 | || | | || ||||| | ||||||||||||| ||| | | ||| ||||| Sbjct 2062369 ACCAGCAACGAAACGAGTGATCTTTCTAGTTACAAAAGTTGGACCTCTACGTGGTGATTC 2062428 Query 47988 ATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTAC 48047 |||||| || | |||||| |||| |||||||| |||| | ||||||||||| || Sbjct 2062429 ATGATTGAATAAGATACCATTACATGCATACATATCGTAAGCCTCACGATAGTTTACAAC 2062488 Query 48048 TATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGT 48107 ||||| || |||| | ||||| ||| | || || |||||||||||||| |||||||| Sbjct 2062489 GATCCAATAGGCATATTGCTTTGCGACAGCGTATGGTGAACGTGGATAGAATGGTGTGGT 2062548 Query 48108 CTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGAT 48167 ||||| |||||| ||||||| || |||||||| | |||| ||| || |||||||| || Sbjct 2062549 CTCTGATTGTGGAATCTCTTGAACTTTACCATATAATTCAGAGGTTGAAGCTTGATA-AT 2062607 Query 48168 A-CGAACCCTATCTTCCATCTCAAGCAA--ACGGACTGCCTCAAGCACTCTCAGGGTGCC 48224 | |||| | | ||||| || ||| ||| | ||| || | | | || || Sbjct 2062608 ATTTAACCTTTTTCTCCATACCA--CAACTACGAATTGCATCCAATAAACGAAGACAACC 2062665 Query 48225 TATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTG 48284 || |||| | ||| ||||| || | ||| ||||| ||||| || |||||||| || Sbjct 2062666 TAAACCATCAACATCACCTGTATATTCTGACATATCAAATGAAACTTTAACATGACTTTG 2062725 Query 48285 TGCCCCAAGATTATAAATCTCATCTGGTTGAAC 48317 ||| || | ||||||||| ||| ||| | ||| Sbjct 2062726 TGCACCTAAATTATAAATTTCAGTTGGATTAAC 2062758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665494058934120