Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq6 116 8e-21 >seq6 Length=3602379 Score = 116 bits (128), Expect = 8e-21 Identities = 332/494 (67%), Gaps = 21/494 (4%) Strand=Plus/Plus Query 298824 GCAAAAGAAGGCAAACTAGATCCTATGATTGGTCGCCAGAAAGA-ATT-GTCTGCATTGA 298881 ||| |||| || ||| |||||||| | |||||| | | |||| ||| ||| | || | Sbjct 116694 GCACAAGAGGGTAAATTAGATCCTGTAATTGGTAGAGATGAAGAGATTCGTC-GTGTT-A 116751 Query 298882 TTGAGACT-CTTGCTCGCAAAACCAAAAAGAATGCTATTCTCACTGGTGAAGCTGGTGTA 298940 || ||| | ||| | | | ||||||||| ||| | || | | ||||||| ||||||| Sbjct 116752 TT-AGAGTACTTTCCAGAAGAACCAAAAACAATCCAGTTTTGATTGGTGAACCTGGTGTT 116810 Query 298941 GGTAAAACACAAATCATCGACGGGCTTGCACAAGCTATTGCTGATGGTAACGTACCTGAA 299000 |||||||| | | | || || | |||||| ||||| |||| | | ||||| Sbjct 116811 GGTAAAACTGCAGTTGTTGAAGGTTTAGCACAACGTATTGTACGTGGTGATATTCCTGAT 116870 Query 299001 CACCTGAAAG-ACGTTGAAATTCTTTCACTAAATGTTGGTGCATTGACTGCTGGTACTAA 299059 | |||| | |||| || | || | || | |||||||| | ||| ||| | || Sbjct 116871 AATTTGAATGCACGTG----TTATAGCATTGGATATGGGTGCATTAATTGCCGGTGCAAA 116926 Query 299060 GTATCGTGGTGAATTTGAAGAACGCATCGACAATTTGCTAAAAGAA-CTAAAGA--AACG 299116 |||||||||||| ||||||||||| | | | | || |||||| |||||| | Sbjct 116927 GTATCGTGGTGATTTTGAAGAACGTTTAAAAGCTGTACTTAAAGAAGTTAAAGATTCAAA 116986 Query 299117 TGAAAATACTATTGTTTTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAG 299176 || || ||| | |||||||||||||| ||| | | | || |||||| || Sbjct 116987 TGGTGGTATCATTTTATTCATTGATGAAATCCATTTGGTATTGGGTGCTGGT---AAAAC 117043 Query 299177 TAATGGTTCTATGGACATG-AGCAATATGCTT-AAGCCAGCACTTTCACGTGGTGAGATT 299234 ||||| | |||| ||| |||| | || || ||| | || | ||||| || Sbjct 117044 CGATGGTGCAATGG--ATGCTGCAAACTTATTGAAACCAATGTTGGCAAGAGGTGAACTT 117101 Query 299235 CGTGTAATTGGTGCAACAACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCA 299294 ||| |||||||| ||||||| |||||||||||| || | |||| || ||| ||| Sbjct 117102 CGTTGTATTGGTGCTACAACATTGGATGAATATCGTCAATACGTCGAAAAGGATCCAGCA 117161 Query 299295 TTAACTCGTCGTTT 299308 || |||||||| Sbjct 117162 TTTGAACGTCGTTT 117175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115170614186629