Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq4 165 1e-35 >seq4 Length=5450249 Score = 165 bits (182), Expect = 1e-35 Identities = 359/535 (67%), Gaps = 2/535 (0%) Strand=Plus/Minus Query 161173 TGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATA 161232 ||| || || || |||| ||||| |||||||| ||||| || || || | ||||| Sbjct 2062747 TGAAATTTATAATTTAGGTGCACAAAGTCATGTTAAAGTTTCATTTGATATGTCAGAATA 2062688 Query 161233 TACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGG 161292 ||||| | ||||| | | || || | ||||||| ||| ||||| || Sbjct 2062687 TACAGGTGATGTTGATGGTTTAGGTTGTCTTCGTTTATTGGATGCAATTCGTAGTTGTGG 2062628 Query 161293 TATG-ACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTAC 161351 |||| | | | ||| | ||| || || || || ||| ||| || ||||| || | Sbjct 2062627 TATGGAGAAAAAGGTTAAATAT-TATCAAGCTTCAACCTCTGAATTATATGGTAAAGTTC 2062569 Query 161352 AAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTA 161411 |||||| ||||| ||| || ||||| ||||| ||||| || ||||| | || || | Sbjct 2062568 AAGAGATTCCACAATCAGAGACCACACCATTCTATCCACGTTCACCATACGCTGTCGCAA 2062509 Query 161412 AACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTA 161471 | | |||| |||||||| || ||||| | ||| ||| | ||| | || ||| Sbjct 2062508 AGCAATATGCCTATTGGATCGTTGTAAACTATCGTGAGGCTTACGATATGTATGCATGTA 2062449 Query 161472 GTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGA 161531 |||||| ||||||| ||||| |||||||| | ||| ||||| ||||| | |||| Sbjct 2062448 ATGGTATCTTATTCAATCATGAATCACCACGTAGAGGTCCAACTTTTGTAACTAGAAAGA 2062389 Query 161532 TTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATC 161591 | ||| | | | ||||| || | | || ||| ||| | |||||| Sbjct 2062388 TCACTCGTTTCGTTGCTGGTATTGCATGTGGTAGAGATGAAATTCTCTACTTGGGTAATA 2062329 Query 161592 TAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGT 161651 | ||| | | ||| ||||||||||| ||| ||| || || || || |||||||| |||| Sbjct 2062328 TCAACGCTAAACGTGATTGGGGTCACGCTAGAGATTACGTTGAAGCAATGTGGTTAATGT 2062269 Query 161652 TACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGT 161706 ||||||| || | || || || | || |||||||| ||| || ||||||| Sbjct 2062268 TACAACAAGAGAAGCCAGAAGATTTCGTTATTGCCACTGGTGAAACTCATTCAGT 2062214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929225911080