Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 178 2e-39 >seq4 Length=5450249 Score = 178 bits (196), Expect = 2e-39 Identities = 1110/1762 (63%), Gaps = 52/1762 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || || |||||||| || ||||| | || | |||||| | || | ||||||||||| Sbjct 1505909 CGAAGATAGTACATACCAGTCTTTAAACCTTTCTTCCATGAGTAGAAATGCATTGAGGTG 1505850 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | || | | |||||| | ||||| | || | |||||| |||||||||||| Sbjct 1505849 AGTTTAGCAAAGGTTGGTTCAGCAATGAAAACATTGAAACTTTGACTTTGATCGATGAAA 1505790 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTCCT 118015 || ||||| || |||||||| || | | | ||| | ||||||||| || || | Sbjct 1505789 GCACCACGATCAGCAGCCATATCGATGAGAGTTCTTTGACG-GATTTCCCAAACTGTTTT 1505731 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075 ||||| | || | |||||| ||||| | |||| ||| ||||| |||| || Sbjct 1505730 ATAGAGTTCTTTCAAATCATCAGGGATGCCACCGATGGATTGAATGGAACCACGTGCAGC 1505671 Query 118076 GACCATGAGATCCTTCATATCCTTTGACCAGA-GACCAATCTTTTTGAGATCCTCCACGA 118134 || || ||| |||||| || |||||| | | ||||| | ||||||| || | | Sbjct 1505670 AACGATTTGATTCTTCATCTCTGGTGACCAAATGCCCAAT-TCCATGAGATCTTCGAGTA 1505612 Query 118135 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 118194 || || ||||||| || ||||| || | || | || || |||| | Sbjct 1505611 ATTGTTTGTTGACAATTGTGAATTCACCTGCTAAAACACGACGACTGTAAATGTTGGAAG 1505552 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 |||| || |||||||| ||||||||||| | |||||| ||| || || || ||||| | Sbjct 1505551 TGTAAGGTTCAAAGCATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCATTG 1505492 Query 118255 GTGCCATGAGAAGGCTGTTACGGA---GACCCTTTTCCCTAATGCGTTCCTTGAGAGC-G 118310 |||| ||||| || ||||| | |||||| | |||| ||||| || | | Sbjct 1505491 GTGCAATGAGGAGTGAATTACGTAAACCACCCTTATTGACAATGTTATCCTTTAGCTCTG 1505432 Query 118311 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370 || | || | || ||| || | | | |||||||||||| ||||||||||||| | Sbjct 1505431 CCCAATTCCAACGAGAACTTGGTGT-AACATTCCACATATCAAATTGGAGGATACCTTTG 1505373 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC-GGAGCT 118429 || ||||| || || | || | ||||| | || ||| ||||||||| ||| Sbjct 1505372 GAAGCTGGTGAACCTTTGAAAGATTCATAGGTACCATCACGGATCGCCAATTCATGAG-A 1505314 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 118489 || | || || || || ||||| || | |||| | | ||| | Sbjct 1505313 GGCAGTCAAAGCGGCAAAGTAAATGGTTTCGGCGATTTCAACATTTAATTTAGCGGCGGC 1505254 Query 118490 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 118549 | ||| || | | || ||| || ||||| || | |||||| | ||| | Sbjct 1505253 AACACTATCGAAAGGCATACGCATTTTAATGAAAACATCGGCCAAACCTTGAATACCAAT 1505194 Query 118550 GCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCT 118609 |||||||| |||||||| | ||| || | ||| |||| |||||| | || | Sbjct 1505193 ACCAATTGGACGATGTCTAAGATTTGAAGTTTTAGCCTCAGCCACTGGATAATAGTTACG 1505134 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA---------TGAAG 118660 |||||| | || ||||| ||| | | ||||||||||||| ||| | Sbjct 1505133 ATCGATGATAACGTTAAGATTGACGGTTATTAACTTTGTGATTTCAAATAGGAATTGATG 1505074 Query 118661 --------CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG----ACATACTTAGGAAG 118708 ||||| | | | ||| || | ||| ||| |||| ||||| Sbjct 1505073 GTCAAACTCTTTTTCTTTTGGATCGGTTGAGCCTACTTTTTGACGAACAAACTTTGGAAG 1505014 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTT 118767 || || || || |||||||| || | | | |||| || | | ||||| | || || | Sbjct 1505013 TGCTATAGAGGCAAGATTACAAACGGCGATTTCAT-CTGGTGATGTGTATTGAATGATCT 1504955 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | || || | || ||| ||||||| || || ||||||||||| || || | |||| Sbjct 1504954 CGGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTTAGCATTAC 1504895 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | ||||||||||| | ||| |||| || || || || ||| |||| | ||| || Sbjct 1504894 AGGCATCCTTGTACAAAATGAATGGAGTACCAGTTTCAACTTGAGACTCCATAATGGCGA 1504835 Query 118888 TCCAGACATCGGCAGC-----TGGCACAGTGGCGTTGGCTCGCCCCTCTT-CCTCGTACT 118941 ||| | || ||| || ||| | | | || | | || | ||||| | Sbjct 1504834 ACCAAAGTTCTTGAGCTTTAATGACAC---GTCTTGGGAGGTCAGGTGTTGCTTCGTATT 1504778 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 | ||||| || | || || | || | || |||||||| | || || Sbjct 1504777 TCAAATAGAGAGCACGATGTTCCTCTGAGTGAGTTTCAGCAAGACCTGGTGCTTCATTTG 1504718 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 | || ||||| | ||| | ||| | || || || | ||| || | || | || Sbjct 1504717 GACAAAAGAGGGCCCAATCGCCATTTTGTTCGACACGTTCCATAAAAATATCACTAACCC 1504658 Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 | || || |||| ||||| | | | ||||| | || || | | Sbjct 1504657 AAAGAGCATAGAATAGATCTCTAGCTCTCATCTCTTCCTTACCAGTGTTTTTCTTTAGAT 1504598 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 | | ||| || | || ||| |||||||| ||||||| ||| || || | | ||||| | Sbjct 1504597 CAATAAATTCAAAGACATCAGCGTGCCATGGTTCCAAGTAAACGGCAAAGGCACCCTTTC 1504538 Query 119182 ---GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | |||| | || | || || | ||||| | || || |||||||||||||| | Sbjct 1504537 TCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCATTGGCA 1504478 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 | ||||| | | ||||| || || |||||| | | | || | || ||| | Sbjct 1504477 CCAAACCATTGCTTGTACCATTGGTACCACGAATATAACTTTGAGCAGCAC-GA-ATCTT 1504420 Query 119299 -GGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 || ||| ||||||||||| || || | |||||| || | || || | | | | | Sbjct 1504419 ATGAACTGCAATACCAATACCACCGGCACTCTTTGAAATGAGTGCACATTGTTTCAAAGT 1504360 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGAAGCAGCTCGACATTT 119415 | | || || |||||||| || || |||| ||||| | | ||| || ||||||| Sbjct 1504359 GTCATAAATACCATCGATTGAATCCTCCTTCATTTG-AACCAAGAAACAAGATGACATTT 1504301 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGG 119475 | || |||||||| |||||||| ||||||||||| || || |||||| | | Sbjct 1504300 GTGGTGATGGTGTACCTGCGTTGAATAGAGTTGGTGTGGCATGAGTGAACAATTTCTCAG 1504241 Query 119476 ACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 119535 ||| | |||||| | | | | | | |||||| || || ||||| || |||| Sbjct 1504240 ACAAACGTTTGTAGGTGTTGATGGCAGATTCGAGGTCTTCGCCATGGATACCAATGGAGA 1504181 Query 119536 CCCGCATAAACATGTATTGGGG 119557 | ||||| ||||||| ||| || Sbjct 1504180 CACGCATCAACATGTGTTGTGG 1504159 Score = 105 bits (116), Expect = 8e-18 Identities = 148/202 (73%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG---C 14208 ||| |||||||| ||| ||| | |||||| | || | || ||||||||||||| | Sbjct 1752721 AAAACCATCCATTTCAACCAACAATTGATTTAATGTATTCTCACGTTCATCATTCGAACC 1752780 Query 14209 AGGCATACCACCCGCACTGCGTTGCT-TACCGACGGCGTCAATTTCATCGATGAAAACGA 14267 || | |||||| || | ||||| |||| || || ||||||||||||||||| || | Sbjct 1752781 AGAGAAACCACCTTTACCTC-TTGCTCTACCAACTGCATCAATTTCATCGATGAATACAA 1752839 Query 14268 TACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTC-TCTTGGCACCGACA 14326 |||||||| ||| | | || |||||| | ||||| || | | ||| ||| ||| Sbjct 1752840 TACATGGTGCATTCTTTCTAGCCTGTTCAAATAGATCTCTAACACGTGATGG-ACCAACA 1752898 Query 14327 CCCACAAACATCTCCACAAAAT 14348 || ||||||||||| || |||| Sbjct 1752899 CCAACAAACATCTCTACGAAAT 1752920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434883051960