Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 3e-11 >seq6 Length=3602379 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 22659 ATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTTATTTACGTAAAATACATCCTTA 22718 ||| ||||||| || | ||| ||||||||||| || || | ||| || | | Sbjct 2804965 ATTCTTTCAAAGATTAATTGGGCTACTCTATCCCCAACTGCAACTTTAAAGTCAACAT-- 2805022 Query 22719 CTAAA--ATTAAATAACAATATACCTATATTTCCCCTGTAATCTCTATCTATCACACCCG 22776 || || ||| ||||| | || ||| | ||| || || |||||| ||| || ||||| | Sbjct 2805023 CTGAATGATTGAATAAAACTACACCAACATTACCTCTATAATCTGAATCAATAACACCAG 2805082 Query 22777 CGCCTACATCGATAAAATGATTACATGCCAATCCCGATCTAGGAGATATTCTTCCATATA 22836 | || |||||| |||| || ||||| || || ||||| || | ||||| ||||| Sbjct 2805083 CACCACAATCGATGAAATTTTTCCATGCTAAACCTGATCTTGGTGCAATTCTACCATAGG 2805142 Query 22837 ATCCTTCCGGTATATCTATTATAATATCAGTCATTACTAATTGTTTACC 22885 || || || || | ||| || ||| |||||| ||||| ||| || Sbjct 2805143 TACCATCTGGAATTGCAATTTGAAGATCTGTCATTGCTAATGCTTTTCC 2805191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603180490869840