Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=6357299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | |||| ||| || || || |||||||| ||||| Sbjct 5640460 TTGCATACCACCTCTTAATCTGAGGACCAAGTGGAGAGTTGATTCTTTTTGGATATTGTA 5640401 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| || | || || | || || || || || || | ||| || ||||| Sbjct 5640400 ATCAGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGATC 5640341 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||| || || ||||| || || | ||| | ||| |||| Sbjct 5640340 TGGTGGAATACCTTCTTTATCTTGAATCTT-TGTTTTTACATTCTCAATGTTGTCACTAC 5640282 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| ||||| || ||||||||||| || ||||||||||| Sbjct 5640281 CTTCAACTTCGAGTGTAATAGTCTTACCGGTGAGGGTCTTTACAAAGATTTGCAT 5640227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | || | || || ||| |||||||| |||||||| Sbjct 5640916 TTGCATACCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTA 5640857 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| || | || |||| || || ||||| || || | ||| || ||||| Sbjct 5640856 ATCAGAGAGAGTACGACCATCCTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATC 5640797 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||| || || || || |||| || ||| | ||| | || | Sbjct 5640796 TGGTGGAATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTCTCAATGTTATCAGAAC 5640738 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| ||||| || |||||||| || || || |||||||| Sbjct 5640737 CTTCAACTTCGAGTGTAATAGTCTTACCAGTGAGGGTTTTGACAAAAATTTGCAT 5640683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990220117297