Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5 107 4e-18 seq16 86.0 1e-11 seq24 84.2 5e-11 seq21 84.2 5e-11 seq20 84.2 5e-11 seq19 84.2 5e-11 seq10 84.2 5e-11 seq8 84.2 5e-11 seq2 84.2 5e-11 seq1 84.2 5e-11 >seq5 Length=4166812 Score = 107 bits (118), Expect = 4e-18 Identities = 319/477 (67%), Gaps = 20/477 (4%) Strand=Plus/Plus Query 230167 AAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTC--CG 230224 || ||||||||||| ||| | || || | | |||||||||| ||| ||||| | Sbjct 871689 AAGTCGTTTGCCGAACGTTTGGTAGCTTTTGCCGCCGTTGAAGGTA-TCT-TTTTCAGTG 871746 Query 230225 GGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGT 230284 | |||||||| | ||||||||||| ||| ||| | ||||| || ||| | | Sbjct 871747 GTAGTTTCTGTTCGATCTTTTGGCTCAAGAAGCGTGGTCTCATGCCAGGTCTCACCTTTT 871806 Query 230285 CTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATT 230344 | |||||||| |||||||| ||||| ||||||||| | || | | ||| | ||| Sbjct 871807 CCAACGAGTTGATCAGTCGTGACGAAGGTCTCCATTGCGACTTTGCCTGTCTTCTCTATA 871866 Query 230345 CAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTG 230404 |||||| | || ||||| || |||| || || |||||| || || || | Sbjct 871867 ACAAGCTCAACAATAAGCTCGACGTCAAGACCATCGAATCCATCATTCGTGACGCCGTCG 871926 Query 230405 AAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCG-CCTTATTGGCATGAAC--- 230460 || |||||||| || | |||| | || | |||| || |||||||||||| Sbjct 871927 AATGTGAAAAGGAATTTGTCACTGACTC-GTTGCCCGTCGATCTCATTGGCATGAACAGT 871985 Query 230461 GCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGT 230520 |||| ||| | ||||| |||||| ||||| || | | || | ||||| Sbjct 871986 CGTGAA---ATGTCCAAATACATTGAATTCTGTGCCGATCGTCTCCTCGTCTCGCTTGGC 872042 Query 230521 TACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAA 230580 ||| ||||| | ||||| ||| || || |||| | ||||| | ||||| | ||| Sbjct 872043 TACAAGAAAATCTACAATTCTGCCAATCCATTTGATTGGATGGAAATGATTTCAC-TCAT 872101 Query 230581 G-GGAAGACCAACTTCTTCGAA--AAGCGTGTCAGTGACTAT-CAGAGGCCTGGTGT 230633 | | ||| | ||||| |||||| || || || ||| ||| || ||| ||||||| Sbjct 872102 GCGAAAGGCAAACTTTTTCGAAGGAAAGGTATC--TGAATATGCAAAGG-CTGGTGT 872155 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 229759 TTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGG 229818 |||||||| ||||| ||||||| ||| ||||||| || ||||| | ||||| || ||| Sbjct 871194 TTCCCAATTAAATATACCGATATTTGGAATATGTATAAAAAGGCAGAGGCAAGCTTTTGG 871253 Query 229819 ACCACTGAGGAAGTTCCTCTGAACGCA---GACGTCGTCGACTGGCGTGAGAAACTCAAT 229875 || | || || || | || ||| || ||| ||| ||| | ||| | ||| Sbjct 871254 ACAGCCGAAGAGATTGATTTG---GCAAGTGATGTCAACGAATGGGAGAATAAATTGAAT 871310 Query 229876 GACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATT 229935 ||| | |||||||| || ||||| | | | | |||||||| | ||| ||||||||| Sbjct 871311 GACAATGAACGTCACTTTATCAAGAATGTATTGGCCTTTTTCGCTGCCTCTGATGGTATT 871370 Query 229936 GTGATGGAAAATCT 229949 || | ||||| || Sbjct 871371 GTCAACGAAAACCT 871384 >seq16 Length=3468650 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| |||||||||||||||||||| || ||||||| || ||||||| |||||||| Sbjct 2897600 TTGCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGA 2897541 Query 165768 GCCCC 165772 ||||| Sbjct 2897540 GCCCC 2897536 Score = 84.2 bits (92), Expect = 5e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| || ||||||| || ||||||| ||||||||| Sbjct 647053 TGCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAG 647112 Query 165769 CCCC 165772 |||| Sbjct 647113 CCCC 647116 >seq24 Length=3408800 Score = 84.2 bits (92), Expect = 5e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| || ||||||| || ||||||| ||||||||| Sbjct 2484800 TGCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAG 2484859 Query 165769 CCCC 165772 |||| Sbjct 2484860 CCCC 2484863 >seq21 Length=1919465 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 72738 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 72793 >seq20 Length=941765 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 295478 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 295423 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 300100 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 300155 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 526162 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 526107 >seq19 Length=761004 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 79223 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 79278 >seq10 Length=499581 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 107195 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 107250 >seq8 Length=1908399 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 808438 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 808383 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 974212 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 974157 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||||||||| | ||||||| ||||||||||||| Sbjct 1231186 TAGCTCAGTCGGTAGAGCGCAAGACTTTTAATTTTGTGGTCGGGGGTTCGAGCCCC 1231241 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 1299355 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 1299300 >seq2 Length=1770755 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 935369 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 935424 Score = 84.2 bits (92), Expect = 5e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| || ||||||| || ||||||| ||||||||| Sbjct 955426 TGCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAG 955367 Query 165769 CCCC 165772 |||| Sbjct 955366 CCCC 955363 >seq1 Length=2485436 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct 1267835 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCC 1267890 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 281823 ATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACC 281882 ||||| || || || || |||| ||||||| || || || || ||| ||| Sbjct 2083320 ATGTTGTTACTACCAACAAAATCTTGAGCCATTTTAACAATGGTAGAAGAAAGAGATTGT 2083379 Query 281883 TCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACG 281942 ||||| || |||||||| | ||||| |||||||||||| ||| || || || || | Sbjct 2083380 TCACCATGATGATAGGCAGTATGTTCAGCAACATAACCAGAGAATTGAGCCACTTTGATT 2083439 Query 281943 TCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAA 282002 || |||||| || | ||| ||||| ||| | | ||| || ||| ||| || ||| Sbjct 2083440 TCACTTGTCAACTTTCTTTTAAAAGCAGCATAAAGAATTTTACGCTGACCAGGTTTCAAA 2083499 Query 282003 CCATCAACGACAGACGGAATGCTGCG 282028 ||||| | ||| || || || || || Sbjct 2083500 CCATCCATGACCGATGGGATACTACG 2083525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823661165750