Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=4166812 Score = 118 bits (130), Expect = 1e-21 Identities = 224/324 (69%), Gaps = 13/324 (4%) Strand=Plus/Minus Query 16176 TATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGC 16235 ||| ||| || | ||| | | ||||| || ||||||||||| || |||||||| | | Sbjct 871881 TATTGTTGAGCTTGTTATAGAGAAGACAGGCAAAGTCGCAATGGAGACCTTCGTCACGAC 871822 Query 16236 TGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATA 16295 |||| | ||||||||||| || | |||||||| || || ||||| | ||| || | Sbjct 871821 TGATCAACTCGTTGGAAAAGGTGAGACCTGGCATGAGACCACGCTTCTTGAGCCAAAAGA 871762 Query 16296 TCG--CAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCG 16353 ||| ||| || | | | |||| || ||||| ||||| | |||||||| | || || Sbjct 871761 TCGAACAGAAACTACCACTGAAA--AAGATACCTTCAACGGCGGCAAAAGCTACCAAACG 871704 Query 16354 TTCCGCGTACGTAGCATCTTTA-TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTT 16412 ||| || ||| | | | || ||||||| || |||| || ||||||| | Sbjct 871703 TTCGGCAAACG----ACTTGGAGTTGGTAATCCATCTCAAAGCCCAGTCAGCTTTTTTCT 871648 Query 16413 TTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTC--CTGAATATCGAT 16470 ||| ||| || ||||| || || ||||| ||| || |||||| ||| || | | Sbjct 871647 TTACACATGGAATAGTTTCAATTGCATTAAATAATACCTTTTTTTCATCTGGATTT--TT 871590 Query 16471 TATATACGTATCAATCAGTAAACT 16494 ||||| |||||||| | |||||| Sbjct 871589 AATATATGTATCAATTAATAAACT 871566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414240183000