Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq24 105 5e-18 seq21 95.1 1e-14 >seq24 Length=3408800 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| |||||||| ||||| ||||| ||| ||| ||| | Sbjct 192637 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACCTTGGAAGTCGAAGGTTCT 192578 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| || || |||||| | || |||||| Sbjct 192577 GACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192518 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| || |||||||| ||||| | |||| | |||||||||| Sbjct 192517 CAACGTCTCATCTTTGCCGGTAAACAATTAGAAGACGGCCGAACTCTTTCCGATTACAAC 192458 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 || ||||||||||||||||| || Sbjct 192457 ATCCAAAAGGAATCTACTCTCCA 192435 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || | || || || ||||| ||| |||| ||| | Sbjct 192865 ATGCAAATTTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGATCC 192806 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| || || |||||| | || |||||| Sbjct 192805 GACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192746 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| || |||||||| ||||| || |||| || | || ||||| Sbjct 192745 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTTTGTCGGACTACAAC 192686 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 || ||||||||||| ||||| || Sbjct 192685 ATCCAAAAGGAATCCACTCTCCA 192663 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 || ||||||||| || | |||||||| || || |||||||||||| ||| ||| Sbjct 193097 AACAATGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGAAGG 193038 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | | || || | | || ||||| || ||| || || |||||| | || || Sbjct 193037 CTCTGACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGA 192978 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||||||| | || || || || || |||||||| || ||| | ||| | | ||||| Sbjct 192977 TCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATTA 192918 Query 25211 CAATATTCAAAAGGAATCTACTCTTCA 25237 ||| || ||||||||||| ||||| || Sbjct 192917 CAACATCCAAAAGGAATCCACTCTCCA 192891 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||||||||| | ||||||||||| || |||||||| || Sbjct 192087 GACAAGGAAGGTATCCCACCTGATCAACAACGTCTTATCTTTGCCGGTAAACAATTAGAG 192028 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| || ||| | | |||||||| |||||||||||||| ||||| || Sbjct 192027 GATGGCAGAACCCTCTCGGATTACAACATTCAAAAGGAATCCACTCTCCA 191978 >seq21 Length=1919465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || ||||| || || || ||||| || ||| ||| | Sbjct 1352608 ATGCAAATCTTTGTAAAGACATTAACCGGTAAGACCATCACTCTTGAAGTTGAAGGATCC 1352667 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| || || |||||| | || |||||| Sbjct 1352668 GACACTATCGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352727 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| || || ||||| ||||| | |||| || |||| || || Sbjct 1352728 CAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352787 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||| ||||| || | || ||| ||||||| || || Sbjct 1352788 ATTCAAAAGGAATCAACTCTCCATCTCGTATTAAGATTACGTGGTGG 1352834 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 25022 TAATAGTGTAAAA--ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCC 25079 ||||||| ||| |||||||| || | ||||| || || || || ||||||||| Sbjct 1444190 TAATAGTAACAAATCATGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTG 1444249 Query 25080 GAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGT 25139 || ||| | || || | | || ||||| || || || || |||||| Sbjct 1444250 GAGGTTGAAGGTTCTGACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGT 1444309 Query 25140 GTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACT 25199 | || ||||||||| | || || ||||| || |||||||||||||| || |||| Sbjct 1444310 ATTCCACCTGATCAACAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACT 1444369 Query 25200 ATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 || | |||||||| |||||||||||||| ||||| || Sbjct 1444370 TTGTCGGATTACAACATTCAAAAGGAATCCACTCTCCA 1444407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||||||||| | || || ||||| || |||||||||||| Sbjct 1444982 GACAAGGAAGGTATTCCACCTGATCAACAACGTCTCATTTTTGCCGGTAAACAATTGGAA 1445041 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 || || |||| || | |||||||| |||||||||||||| ||||| || Sbjct 1445042 GACGGCAGAACTTTGTCGGATTACAACATTCAAAAGGAATCCACTCTCCA 1445091 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| |||||||| ||||| ||||| || ||| || | Sbjct 1444433 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCT 1444492 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || || || || ||||| | || |||||| Sbjct 1444493 GACACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAA 1444552 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| ||||| || | ||||| || |||| || | |||||||| Sbjct 1444553 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAAC 1444612 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 |||||||||||||| ||||| || Sbjct 1444613 ATTCAAAAGGAATCCACTCTCCA 1444635 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || | || || || ||||| ||| |||| ||| | Sbjct 1444661 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGTTCG 1444720 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | ||||| || ||| || || |||||| | || |||||| Sbjct 1444721 GACACCATTGAAAACGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1444780 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| || |||||||| ||||| || |||| | |||| ||||| Sbjct 1444781 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTCTTTCCGACTACAAC 1444840 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 || |||||||| || ||||| || Sbjct 1444841 ATCCAAAAGGAGTCCACTCTCCA 1444863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796674835350