Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq21 158 2e-33 seq24 138 2e-27 >seq21 Length=1919465 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| || || || || || || || || | ||| |||||| | | Sbjct 1351924 ATGCAAATTTTTGTAAAAACTCTTACTGGTAAGACCATCACCTTGGAGGTTGAAGGATCT 1351983 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| || |||||||| || |||||||| |||||||||||| Sbjct 1351984 GATACCATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 1352043 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| ||||| |||||||| || |||| || ||| || ||||| Sbjct 1352044 CAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGTCGCACTTTATCCGACTATAAC 1352103 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || ||||| | || ||||| | ||| | || |||||||| Sbjct 1352104 ATTCAAAAGGAGTCAACCCTTCACTTGGTCCTCCGTCTCCGTGGTGGTAT 1352153 Score = 152 bits (168), Expect = 8e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||||||| |||| || || || || ||| | || |||||| | Sbjct 1352608 ATGCAAATCTTTGTAAAGACATTAACCGGTAAGACCATCACTCTTGAAGTTGAAGGATCC 1352667 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || |||||||| || |||||||| |||||||||||| Sbjct 1352668 GACACTATCGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352727 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| ||||| |||||||| || | |||| || || ||||| Sbjct 1352728 CAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352787 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 |||||||| ||||||||| | ||| | || ||| | ||||| ||||||| Sbjct 1352788 ATTCAAAAGGAATCAACTCTCCATCTCGTATTAAGATTACGTGGTGGTA 1352836 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || |||||||| ||| | || | |||| | Sbjct 1352380 ATGCAAATTTTCGTCAAGACCCTCACTGGTAAAACTATCACTTTGGAAGTGGAAGGATCC 1352439 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || |||| || |||||||| || |||||||| |||||||||||| Sbjct 1352440 GATACCATTGAAAACGTAAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352499 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| || ||||||||||| || | |||| || || ||||| Sbjct 1352500 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352559 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||||||| | ||| | || | ||| | || |||||||| Sbjct 1352560 ATTCAAAAGGAATCAACTCTCCATCTCGTCCTTCGTCTCCGTGGTGGTAT 1352609 Score = 136 bits (150), Expect = 6e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| || || || || || || ||| | || |||| | | | Sbjct 1444889 ATGCAAATCTTTGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTTGAGGGATCT 1444948 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || |||||||| || |||||||| |||||||||||| Sbjct 1444949 GACACCATTGAGAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1445008 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| || |||||||| || || | |||| || ||||| || Sbjct 1445009 CAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAAC 1445068 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 1445069 ATTCAAAAGGAATCCACTCTCCATCTCGTCCTTCGTCTCCGTGGTGGTAT 1445118 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| || |||| || || || || || | ||| |||||| | Sbjct 1444205 ATGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTGGAGGTTGAAGGTTCT 1444264 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| || |||||||| |||||||||||| Sbjct 1444265 GACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1444324 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| || |||||||| || || | |||| || ||||| || Sbjct 1444325 CAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAAC 1444384 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 1444385 ATTCAAAAGGAATCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTAT 1444434 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| || || || | || | |||| | Sbjct 1352152 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACAATCACCCTCGAAGTCGAAGGATCC 1352211 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || || ||||| || |||||||| |||||||||||| Sbjct 1352212 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1352271 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || |||||||| ||||||||||| || | || || | |||||||| Sbjct 1352272 CAAAGATTAATCTTTGCAGGTAAACAATTAGAAGACGGACGTACTCTTTCCGATTATAAC 1352331 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| ||||||||| | ||| | || | ||| | || |||||||| ||| || Sbjct 1352332 ATCCAAAAGGAATCAACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGTATGCAAATTT 1352389 Score = 107 bits (118), Expect = 3e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||||||| |||| || || || || ||| | || | || | | | Sbjct 1445117 ATGCAAATCTTTGTAAAGACATTAACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 1445176 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || || ||||| || |||||||| |||||||||||| Sbjct 1445177 GACACCATTGAAAATGTCAAAACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1445236 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| ||||| || | || || | |||| | || || || Sbjct 1445237 CAACGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCAGAACTCTTTCCGACTACAAC 1445296 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 || ||||| || || ||| | ||| | || | ||| | || ||||||| Sbjct 1445297 ATCCAAAAGGAGTCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGTA 1445345 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | |||||| | || ||||| || || ||| | || | || | | | Sbjct 1444433 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCT 1444492 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || || ||||| || ||||| || |||||||||||| Sbjct 1444493 GACACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAA 1444552 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || || | || || | |||| || ||||| || Sbjct 1444553 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAAC 1444612 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 1444613 ATTCAAAAGGAATCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTAT 1444662 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || || || || | || | |||| Sbjct 1444661 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGTTCG 1444720 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || |||||||| || |||||||| |||||||||||| Sbjct 1444721 GACACCATTGAAAACGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1444780 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || ||||||||||| || | |||| | || || || Sbjct 1444781 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTCTTTCCGACTACAAC 1444840 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || ||| | ||| | || | ||| | || |||||||| Sbjct 1444841 ATCCAAAAGGAGTCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTAT 1444890 >seq24 Length=3408800 Score = 138 bits (152), Expect = 2e-27 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 || ||||||||||| ||| | || ||| ||||||| ||||| || || | || | ||| Sbjct 193099 AAAACAATGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGAA 193040 Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652 | ||| || || ||| | || || |||||||| || |||||||| |||||| Sbjct 193039 GGCTCTGACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCT 192980 Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712 ||||||||| | || ||||| || || ||||||||||||||| || |||| | ||| Sbjct 192979 GATCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGAT 192920 Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA 124772 || || || ||||| ||||| ||| | ||| | || | ||| | || |||||||| || Sbjct 192919 TACAACATCCAAAAGGAATCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGTATGCAA 192860 Query 124773 AATT 124776 | || Sbjct 192859 ATTT 192856 Score = 129 bits (142), Expect = 9e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | |||||| | || || || || || ||| | || | |||| | Sbjct 192180 ATGCAGATCTTTGTCAAGACATTGACTGGTAAGACCATCACTCTTGAAGTCGAAGGATCC 192121 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| || |||| || || |||||||| || |||||||| ||||||||||| Sbjct 192120 GACACCATTGAAAACGTTAAGACC-AAGATTCAAGACAAGGAAGGTATCCCACCTGATCA 192062 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | ||||| ||||| || ||||||||||||||| | |||| | ||||| || Sbjct 192061 ACAACGTCTTATCTTTGCCGGTAAACAATTAGAGGATGGCAGAACCCTCTCGGATTACAA 192002 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 |||||||| ||||| ||| | ||| | || | ||| | || ||||||| Sbjct 192001 CATTCAAAAGGAATCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTA 191952 Score = 120 bits (132), Expect = 5e-22 Identities = 166/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || || || ||| | || | || | | | Sbjct 192409 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 192350 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAG-AAGGTATACCACCTGATCA 124657 || || ||| ||| | || || || ||||| || | ||||||| ||||||||||| Sbjct 192349 GACACCATTGAAAATGTCAAGACCAAGATCCAAGACAAGGGAAGGTATCCCACCTGATCA 192290 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || ||||| || || ||||||||||||||| || |||| | ||||| || Sbjct 192289 ACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATTACAA 192230 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 192229 CATCCAAAAGGAATCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGTAT 192179 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | |||||| | || ||||| || || || | || | |||| | Sbjct 192637 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACCTTGGAAGTCGAAGGTTCT 192578 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || |||||||| || |||||||| |||||||||||| Sbjct 192577 GACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192518 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || ||||| || ||||||||||| || | ||||| | ||||| || Sbjct 192517 CAACGTCTCATCTTTGCCGGTAAACAATTAGAAGACGGCCGAACTCTTTCCGATTACAAC 192458 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 192457 ATCCAAAAGGAATCTACTCTCCATCTTGTCCTTCGTCTCCGTGGTGGTAT 192408 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || || || || | || | |||| | Sbjct 192865 ATGCAAATTTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGATCC 192806 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | || || |||||||| || |||||||| |||||||||||| Sbjct 192805 GACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192746 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || ||||||||||| || | |||| || || || || Sbjct 192745 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTTTGTCGGACTACAAC 192686 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| ||| | ||| | || | ||| | || |||||||| Sbjct 192685 ATCCAAAAGGAATCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGTAT 192636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455763920000