Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq21 82.4 9e-11 >seq21 Length=1919465 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| |||||||| | || ||| | |||| || |||||||| ||||| || Sbjct 1444623 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCGAGCTGCTTGCCAGCAAAG 1444564 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || || || || | || | | |||||||| ||| || |||| || Sbjct 1444563 ATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTC 1444504 Query 43113 GCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| | || || || || | |||||||| ||||| || | ||||| || Sbjct 1444503 TCGATAGTGTCAGATC-CCTCGACTTCAAGAGTGATGGTCTTGCCGGTCAATGTCTTGAC 1444445 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 1444444 AAAGATTTGCAT 1444433 Score = 82.4 bits (90), Expect = 9e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| |||||||| | || ||| | |||| || | || ||||| || || Sbjct 1445079 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAA 1445020 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 ||||| || || || || | || | | |||||||| ||| | || || |||| | Sbjct 1445019 ATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT-TGAATCTTGGTCTTGACATT 1444961 Query 43112 CGCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| | || | | || || | |||||||| || || || || ||||||| Sbjct 1444960 CTCAATGGTGTCAGATCCCT-CAACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTA 1444902 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 1444901 CAAAGATTTGCAT 1444889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817421307000