Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq21 96.9 3e-15 seq5 86.0 5e-12 seq24 84.2 2e-11 >seq21 Length=1919465 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGT 45185 |||||||| || || |||||| |||||||| |||||| | ||| |||| |||| | Sbjct 1352132 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGT--GCGACCGTCTT 1352075 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | | ||| ||||| || || || | || ||||| || || || | ||| |||||||| Sbjct 1352074 CTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTT 1352015 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | | | || || || ||||||| ||| || |||| Sbjct 1352014 GAATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTCT 1351955 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 | || || ||||| || ||||| ||||||||||| Sbjct 1351954 TACCAGTAAGAGTTTTTACAAAAATTTGCATGTT 1351921 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| |||||| || |||||||||||| || | |||| || | Sbjct 1444868 CAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCTTCTA 1444809 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||||| ||||| || || | || ||||| || || || | ||| |||||||| || Sbjct 1444808 ATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAA 1444749 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | ||||| ||| || || || | ||| || ||||| | Sbjct 1444748 TCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGTCTTAC 1444689 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || ||||| |||||||||||||| Sbjct 1444688 CAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||| ||||||||||| || || ||| | |||| |||| |||||| ||||| | Sbjct 1445079 TCCTTTTGAATGTTGTAATCCGACAAAGTT--CTGCCGTCTTCCAATTGTTTACCGGCAA 1445022 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | || | || ||||| || || || | ||| |||||||| ||| || ||| || Sbjct 1445021 AAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACAT 1444962 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | | |||| ||||| || || | || || ||||| || || || ||||| | Sbjct 1444961 TCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTA 1444902 Query 45324 CAAAGATTTGCAT 45336 ||||||||||||| Sbjct 1444901 CAAAGATTTGCAT 1444889 >seq5 Length=4166812 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| || |||||||||||| || ||| |||| || ||||| || ||||| || Sbjct 207575 CTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAA 207516 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || |||||||| || || | ||| |||||||| || || ||| || Sbjct 207515 GATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 207456 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| |||||| ||||| | |||||| ||||| || || || || || || Sbjct 207455 TTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTCTTACCTGTGAGTGTTTTAAC 207396 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 207395 GAAGATCTGCAT 207384 >seq24 Length=3408800 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||| || |||||||| ||| || || |||| || | |||||| ||||| || Sbjct 192447 TCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCTAATTGTTTACCGGCAAAG 192506 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || ||||| || || || | ||| |||||||| ||| || ||| || Sbjct 192507 ATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTT 192566 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | |||| ||| || || |||| ||| || |||||||| |||| ||||| ||| Sbjct 192567 TCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGACA 192626 Query 45326 AAGATTTGCAT 45336 ||||||||||| Sbjct 192627 AAGATTTGCAT 192637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075079625525