Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq21 147 2e-30 seq24 138 8e-28 seq5 102 6e-17 seq2 95.1 9e-15 >seq21 Length=1919465 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || ||||| ||||| || ||| || | | | |||||||| Sbjct 1352132 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCTTCT 1352073 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| || ||||| | || | ||||||||| || ||| || ||||| ||||| | Sbjct 1352072 AATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 1352013 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||||||| |||| |||||||| ||| || || ||||| ||||| ||| Sbjct 1352012 ATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTCTTA 1351953 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAA 15370 || || ||||||||||||||||||||||| ||| || Sbjct 1351952 CCAGTAAGAGTTTTTACAAAAATTTGCATGTTTTAA 1351917 Score = 145 bits (160), Expect = 6e-30 Identities = 159/210 (76%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| | | |||| ||||||| ||||| Sbjct 1444408 ATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCCAATTG 1444349 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || |||||| ||||| ||||| || || Sbjct 1444348 TTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTT 1444289 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| |||| || || || | ||| || || ||||||||||| ||||| || Sbjct 1444288 GGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTCTTACCAGT 1444229 Query 15340 CAGAGTTTTTACAAAAATTTGCAT-ATTTG 15368 | ||||||||||||||||||||| ||||| Sbjct 1444228 TAAAGTTTTTACAAAAATTTGCATGATTTG 1444199 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| |||||||| ||| ||| |||| ||||||||||||| Sbjct 1444864 ATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCTTCTAATTG 1444805 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || |||||| ||||| ||||| ||| || Sbjct 1444804 TTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 1444745 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| || |||| ||||| || | ||| || || | ||| ||||| ||||| || Sbjct 1444744 GGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGTCTTACCAGT 1444685 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 1444684 GAGGGTCTTGACAAAGATTTGCATA 1444660 Score = 127 bits (140), Expect = 1e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || ||||| ||||| || ||| | | |||| ||||||||||||| Sbjct 1352583 ATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCTAATTG 1352524 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || |||||| ||||| ||||| ||| || Sbjct 1352523 TTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 1352464 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||||| |||| ||||||||| ||| || || || || || |||||||| || Sbjct 1352463 GGCCTTTACGTTTTCAATGGTATCGGATCCTTCCACTTCCAAAGTGATAGTTTTACCAGT 1352404 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || || |||||||||||| Sbjct 1352403 GAGGGTCTTGACGAAAATTTGCATA 1352379 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||||| || | ||| || || || || ||||| ||||| || ||| Sbjct 1352834 CCACCACGTAATCTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGAC 1352775 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| ||||||||||||| || ||||| | || | ||||||||| || |||| Sbjct 1352774 AAAGTTCTTCCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGA 1352715 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| ||| | || || || ||| ||| || Sbjct 1352714 ATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAACT 1352655 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || ||||| ||||| || | || |||||||| ||||||||| Sbjct 1352654 TCAAGAGTGATGGTCTTACCGGTTAATGTCTTTACAAAGATTTGCATA 1352607 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| | | |||| ||||||| ||||| Sbjct 1445092 ATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCCAATTG 1445033 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || |||||| ||||| ||||| ||| || Sbjct 1445032 TTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 1444973 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| | || ||||| || || || || | || ||||| ||||| || Sbjct 1444972 GGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGTCTTACCAGT 1444913 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || |||||||| ||||||||| Sbjct 1444912 GAGGGTCTTTACAAAGATTTGCATA 1444888 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || ||||| ||||| |||||| ||| | | ||||||||||||| Sbjct 1352355 ATGGAGAGTTGATTCCTTTTGGATGTTATAATCGGAAAGAGTACGTCCGTCTTCTAATTG 1352296 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || || | |||||| || |||||| ||||| ||||| || || Sbjct 1352295 TTTACCTGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTT 1352236 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| |||| || || ||| ||| || || | ||| || || || || || Sbjct 1352235 GGCCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATTGTCTTGCCAGT 1352176 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 1352175 GAGGGTCTTGACAAAGATTTGCATA 1352151 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| | | |||| ||||||| | || Sbjct 1444636 ATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCGAGCTG 1444577 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 |||||||| | || | ||||||||| || |||||||||||| ||||| || || Sbjct 1444576 CTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGGATCTT 1444517 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| | || || || || || || || | || ||||| || || || Sbjct 1444516 GGTCTTGACATTCTCGATAGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCTTGCCGGT 1444457 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 1444456 CAATGTCTTGACAAAGATTTGCATA 1444432 >seq24 Length=3408800 Score = 138 bits (152), Expect = 8e-28 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| || |||| | || |||||||| Sbjct 192890 ATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCCTCTAATTG 192949 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | || | ||||||||| || ||| || ||||| ||||| ||| || Sbjct 192950 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTT 193009 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| |||| || || || |||||| || |||||||||||||||||||| Sbjct 193010 GGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTACTTCCAAGGTAATGGTTTTACCTGT 193069 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 | ||||| ||||| |||||||| Sbjct 193070 TAATGTTTTAACAAAGATTTGCAT 193093 Score = 127 bits (140), Expect = 1e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || ||||| |||||||||||| ||| ||| ||||||||||||| Sbjct 192434 ATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCTAATTG 192493 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || ||| || ||||| ||||| ||| || Sbjct 192494 TTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTT 192553 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| |||| || || || | ||| || || ||||| ||||| || || || Sbjct 192554 GGTCTTGACATTTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTCTTGCCGGT 192613 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||||||| Sbjct 192614 CAATGTCTTGACAAAGATTTGCATA 192638 Score = 127 bits (140), Expect = 1e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| |||||||| || | | |||| ||||||||||||| Sbjct 192662 ATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCTAATTG 192721 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || ||| || ||||| ||||| ||| || Sbjct 192722 TTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTT 192781 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| ||| |||| || || ||| ||| || || | ||| ||||| ||||| || Sbjct 192782 GGTCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATGGTCTTACCAGT 192841 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||||||||||||| Sbjct 192842 GAGGGTCTTGACAAAAATTTGCATA 192866 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| || |||| | || |||||||| Sbjct 191977 ATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAGAGGGTTCTGCCATCCTCTAATTG 192036 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | ||||||||| || ||| || ||||| ||||| ||| || Sbjct 192037 TTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTT 192096 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||| || |||| ||||| ||| ||| || || | || ||||| ||||| || Sbjct 192097 GGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGTGATGGTCTTACCAGT 192156 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || |||||| Sbjct 192157 CAATGTCTTGACAAAGATCTGCATA 192181 Score = 102 bits (112), Expect = 6e-17 Identities = 147/206 (71%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || ||||| ||||||||||| || |||| | || |||||||| Sbjct 192205 ATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCCTCTAATTG 192264 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTT-CTTTGTCACAAATTT 15278 ||| || ||| | || | ||||||||| || ||| || |||| | ||||| || | Sbjct 192265 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCCTTGTCTTGGATCT 192324 Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 || |||| ||| |||| ||||| || || || || | || ||||| ||||| | Sbjct 192325 TGGTCTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCTTACCAG 192384 Query 15339 TCAGAGTTTTTACAAAAATTTGCATA 15364 | || || || ||||| ||||||||| Sbjct 192385 TGAGGGTCTTGACAAAGATTTGCATA 192410 >seq5 Length=4166812 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || ||||| |||||||| ||| || | | ||||||| | ||| Sbjct 207587 ATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCTTCGAGTTG 207528 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || || | || | |||||||||||| ||| || ||||| ||||| || || Sbjct 207527 CTTACCGGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 207468 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || |||| || || ||| | ||||| |||||||||||||| |||||||| Sbjct 207467 AGCCTTGACGTTTTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTCTTACCTGT 207408 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| Sbjct 207407 GAGTGTTTTAACGAAGATCTGCAT 207384 >seq2 Length=1770755 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | | | ||| | ||| ||||| || || ||||| ||||||||||| Sbjct 948823 CCACCTCTAAGGCGGAGAACGAGATGGAGGGTAGATTCCTTTTGGATGTTGTAATCCGAG 948882 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | ||||||| | ||| || || || | || | ||||||||| ||| ||| Sbjct 948883 AGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGATCGGGTGGG 948942 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || || ||| || |||| |||||||| | ||| || Sbjct 948943 ATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACT 949002 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15368 || | || ||||| || ||||| | ||| || || || || ||||| |||| Sbjct 949003 TCAAGAGTGATGGTCTTTCCTGTTAAAGTCTTAACGAAGATCTGCATGTTTG 949054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179089648525