Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq21 102 5e-17 >seq21 Length=1919465 Score = 102 bits (112), Expect = 5e-17 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || ||||| ||||| || || || || || ||| || | ||| || Sbjct 1352132 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCTTCT 1352073 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 |||||||||||| ||| || | |||||| || || | || || ||||| || || | Sbjct 1352072 AATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 1352013 Query 33281 ATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 ||| |||| |||| ||| ||| || || || ||| |||| || || || Sbjct 1352012 ATCTTAGCCT---TTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTC 1351956 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || || |||||||||||||| ||||||||||||||| Sbjct 1351955 TTACCAGTAAGAGTTTTTACAAAAATTTGCATGTTT 1351920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777502872450