Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 >seq5 Length=4166812 Score = 109 bits (120), Expect = 5e-19 Identities = 227/330 (69%), Gaps = 11/330 (3%) Strand=Plus/Minus Query 13442 CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCC 13501 ||||| |||| |||||||||||||| || || ||||| |||||||| |||||||| || Sbjct 871480 CTATAAGTTTCAGAATGAATATTTTCAATGGCAATTTGAAAACCATAGAAACATCTTGCT 871421 Query 13502 TCTGATACCTGAACTTCGGAGTAAAATCTTTCT-GCTAAGTTTTCGTTAACTATCCCGTC 13560 || | || |||||||| || | | ||| | || | ||||||||| || || || || Sbjct 871420 TCAGGTATTTGAACTTCAGA-CATGAACTTGGTGGCAAGGTTTTCGTTGACAATACCATC 871362 Query 13561 ACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT 13620 | ||||| ||||| || | || | ||| ||||| | ||| || || ||| || Sbjct 871361 AGAGGCAGCGAAAAAGGCCAATACATTCTTGATAAAGTGACGTTCATTGTCATTCAA-TT 871303 Query 13621 TA----ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAG 13676 || ||| || | ||| ||| ||||| | ||| || | |||||||| | Sbjct 871302 TATTCTCCCATTCGTTGACATCACTTGCCAAATCAATCTCTTCGGCTGTCCAAAAGCTTG 871243 Query 13677 CAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATC 13736 | | ||||| |||||||| |||| ||||| |||| ||| || || | ||| ||| Sbjct 871242 CCTCTGCCTTTTTATACATATTCCAAATATCGGTATATTTAATTGGGAATAGAACAAATC 871183 Query 13737 T-TCCAGTTG-TCTGTCTTAAAATCGGTTC 13764 | ||| ||| ||| | |||| | ||||| Sbjct 871182 TATCC--TTGTTCTCTTTTAATAATGGTTC 871155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982268685050