Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq24 143 3e-29 seq21 120 3e-22 seq2 111 2e-19 seq5 98.7 1e-15 >seq24 Length=3408800 Score = 143 bits (158), Expect = 3e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| | ||||||| | ||||| ||||||||||| || ||| | || ||| | ||| |||| Sbjct 193100 AAAAACAATGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGA 193041 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | ||||| ||||| | ||||| |||||| ||||| ||||| || || || Sbjct 193040 AGGCTCTGACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACC 192981 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 ||||||||| | ||||||| || ||| |||||| | || |||| ||||| | || || Sbjct 192980 TGATCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGA 192921 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||||| ||| ||||||| ||||| Sbjct 192920 TTACAACATCCAAAAGGAATCCACTCTCCATCTCGTCCT 192882 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || ||||| ||||| || | ||||| | ||| | ||| | | Sbjct 192180 ATGCAGATCTTTGTCAAGACATTGACTGGTAAGACCATCACTCTTGAAGTCGAAGGATCC 192121 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || |||||| ||||| ||||| || || || |||||| Sbjct 192120 GACACCATTGAAAACGTTAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192061 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | ||| |||||| | || |||| |||| | || || || ||| Sbjct 192060 CAACGTCTTATCTTTGCCGGTAAACAATTAGAGGATGGCAGAACCCTCTCGGATTACAAC 192001 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| ||||||| ||||| Sbjct 192000 ATTCAAAAGGAATCCACTCTCCATCTTGTCCT 191969 >seq21 Length=1919465 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| |||||||| || || | ||||| | ||| | ||| | | Sbjct 1352608 ATGCAAATCTTTGTAAAGACATTAACCGGTAAGACCATCACTCTTGAAGTTGAAGGATCC 1352667 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | ||||| |||||| ||||| ||||| || || || |||||| Sbjct 1352668 GACACTATCGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352727 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | || || ||| | ||||| | |||| | |||||||||| Sbjct 1352728 CAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352787 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||||| ||||| ||| ||||||| || Sbjct 1352788 ATTCAAAAGGAATCAACTCTCCATCTCGT 1352816 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| ||| | ||||| | ||| | ||| | | Sbjct 1352380 ATGCAAATTTTCGTCAAGACCCTCACTGGTAAAACTATCACTTTGGAAGTGGAAGGATCC 1352439 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || || |||||| ||||| ||||| || || || |||||| Sbjct 1352440 GATACCATTGAAAACGTAAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352499 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| | ||| |||||| | ||||| | |||| | |||||||||| Sbjct 1352500 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352559 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| ||||||| ||||| Sbjct 1352560 ATTCAAAAGGAATCAACTCTCCATCTCGTCCT 1352591 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| || | ||||| || | ||||| | ||| | || | Sbjct 1444889 ATGCAAATCTTTGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTTGAGGGATCT 1444948 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | ||||| |||||| ||||| ||||| || || || |||||| Sbjct 1444949 GACACCATTGAGAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1445008 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| | ||| |||||| | ||||| | |||| | || || ||| Sbjct 1445009 CAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAAC 1445068 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| ||||||| ||||| Sbjct 1445069 ATTCAAAAGGAATCCACTCTCCATCTCGTCCT 1445100 Score = 111 bits (122), Expect = 2e-19 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 26763 AACAAA--ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 |||||| |||||| | ||||||||||| |||||||| || | || ||| | || | | Sbjct 1444197 AACAAATCATGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTGGAGGTTG 1444256 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 || ||||| || || | ||||| ||||| ||||| ||||| || || | Sbjct 1444257 AAGGTTCTGACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGTATTCCAC 1444316 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 | ||||||||| | ||||||| | ||| |||||| | ||||| | |||| | | Sbjct 1444317 CTGATCAACAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGG 1444376 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | || ||||||||||| ||||| ||| ||||||| ||||| Sbjct 1444377 ATTACAACATTCAAAAGGAATCCACTCTCCATCTTGTCCT 1444416 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| ||||||||||| || | ||||| | ||| | || | Sbjct 1445117 ATGCAAATCTTTGTAAAGACATTAACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 1445176 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| ||||| ||||| ||||| || || || |||||| Sbjct 1445177 GACACCATTGAAAATGTCAAAACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1445236 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | || || || |||||||| | |||| | |||||| ||| Sbjct 1445237 CAACGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCAGAACTCTTTCCGACTACAAC 1445296 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || || ||| ||||||| ||||| Sbjct 1445297 ATCCAAAAGGAGTCCACTCTCCATCTCGTCCT 1445328 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| || | |||||| ||||| | ||| | | Sbjct 1352152 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACAATCACCCTCGAAGTCGAAGGATCC 1352211 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | ||||| ||||| ||||| ||||| || || || |||||| Sbjct 1352212 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1352271 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||| | ||||| | | | | ||| |||||| Sbjct 1352272 CAAAGATTAATCTTTGCAGGTAAACAATTAGAAGACGGACGTACTCTTTCCGATTATAAC 1352331 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| ||||||| ||||| Sbjct 1352332 ATCCAAAAGGAATCAACTCTCCATCTCGTCCT 1352363 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || ||||| || || || | ||||| | ||| | || | Sbjct 1444433 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCT 1444492 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | ||||| ||||| ||||| ||||| || || || |||||| Sbjct 1444493 GACACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAA 1444552 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | ||||| || |||||||| | |||| | || || ||| Sbjct 1444553 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAAC 1444612 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| ||||||| ||||| Sbjct 1444613 ATTCAAAAGGAATCCACTCTCCATCTTGTCCT 1444644 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | ||||||||||| | ||||| || | |||||| | || | ||| | Sbjct 1351921 AACATGCAAATTTTTGTAAAAACTCTTACTGGTAAGACCATCACCTTGGAGGTTGAAGGA 1351980 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || ||||| || | || || |||||| ||||| ||||| || || || ||| Sbjct 1351981 TCTGATACCATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAAGGTATCCCACCTGAT 1352040 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | || || | | || || ||| | ||||| | | | | | ||||||| Sbjct 1352041 CAACAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGTCGCACTTTATCCGACTAT 1352100 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||||| || || || | || ||||||| Sbjct 1352101 AACATTCAAAAGGAGTCAACCCTTCACTTGGTCCT 1352135 >seq2 Length=1770755 Score = 111 bits (122), Expect = 2e-19 Identities = 176/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 26750 TACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCAC 26809 |||||| ||| |||||| |||| | || || || || ||||| ||||| | ||||| Sbjct 949064 TACTTTATAG-CAAACA---TGCAGATCTTCGTTAAGACTTTAACAGGAAAGACCATCAC 949009 Query 26810 CATCGAATTAGAA---TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAA 26866 | ||| | ||| ||| || |||||||| | ||||| ||||| ||||| Sbjct 949008 TCTTGAAGTTGAAGGTTCA---GATACCATCGAAAACGTCAAGGCTAAGATCCAAGACAA 948952 Query 26867 AGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGA 26926 ||||| || || |||||||||||| | || || | | ||| || ||||||||||| | Sbjct 948951 GGAAGGTATCCCACCCGATCAACAACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGG 948892 Query 26927 TAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 | | | | || || || ||||| ||||| |||||||| ||||||| || || | || Sbjct 948891 TCGTACCCTCTCGGATTACAACATCCAAAAGGAATCTACCCTCCATCTCGTTCTCCGCCT 948832 Query 26987 TAGAGGAGG 26995 |||||| || Sbjct 948831 TAGAGGTGG 948823 >seq5 Length=4166812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 ||||||| | || || |||||| | || || || | || ||| | || |||| Sbjct 207382 AAATGCAGATCTTCGTTAAAACACTCACAGGTAAGACCATTACCTTAGAGGTAGAGGGTT 207441 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 |||||| ||||| | ||||| ||||| ||||| ||||| || || || || | Sbjct 207442 CCGACACTATCGAAAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCACCTGACC 207501 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 ||||| | || || | | ||| || ||||||||||| | | | | | || |||||| | Sbjct 207502 AACAACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGGTCGTACCCTCTCCGACTACA 207561 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| ||||| || |||||| ||||||| ||||| Sbjct 207562 ACATCCAAAAGGAGTCTACTCTCCATCTCGTCCT 207595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662250418000