Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq24 120 3e-22 seq21 109 5e-19 seq2 91.5 1e-13 seq5 84.2 2e-11 >seq24 Length=3408800 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| | ||||||| | ||||| ||||||||||| || ||| | |||||| | ||||| || Sbjct 193100 AAAAACAATGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGA 193041 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | ||||| ||||| | ||||| |||||| ||||| ||||| || || || Sbjct 193040 AGGCTCTGACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACC 192981 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 |||||||| | || |||| || ||| || ||| | || |||| |||| | || || Sbjct 192980 TGATCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGA 192921 Query 24164 TTATAACATTCAAAAAGAATCTAC 24187 ||| ||||| ||||| ||||| || Sbjct 192920 TTACAACATCCAAAAGGAATCCAC 192897 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||||| ||||| || | || || | |||||||| | | Sbjct 192180 ATGCAGATCTTTGTCAAGACATTGACTGGTAAGACCATCACTCTTGAAGTCGAAGGATCC 192121 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || |||||| ||||| ||||| || || || |||||| Sbjct 192120 GACACCATTGAAAACGTTAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAA 192061 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| || ||| | || |||| ||||| | || ||||| ||| Sbjct 192060 CAACGTCTTATCTTTGCCGGTAAACAATTAGAGGATGGCAGAACCCTCTCGGATTACAAC 192001 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 192000 ATTCAAAAGGAATCCAC 191984 >seq21 Length=1919465 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| |||||||| || || | || || | ||||| || | | Sbjct 1352608 ATGCAAATCTTTGTAAAGACATTAACCGGTAAGACCATCACTCTTGAAGTTGAAGGATCC 1352667 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | ||||| |||||| ||||| ||||| || || || |||||| Sbjct 1352668 GACACTATCGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1352727 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || |||||| | ||||| | |||| | ||| |||||| Sbjct 1352728 CAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGAAGAACTTTGTCCGACTATAAC 1352787 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208 |||||||| ||||| || | ||| | || |||||||| Sbjct 1352788 ATTCAAAAGGAATCAACTCTCCATCTCGTATTAAGATT 1352825 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||||| || || || | || || | |||||||||| Sbjct 1444433 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCT 1444492 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | ||||| ||||| ||||| ||||| || || || |||||| Sbjct 1444493 GACACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAA 1444552 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||| |||||||| | ||||| | ||||| ||| Sbjct 1444553 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAAC 1444612 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 1444613 ATTCAAAAGGAATCCAC 1444629 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| ||||||||||| || | || || | |||||||||| Sbjct 1445117 ATGCAAATCTTTGTAAAGACATTAACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 1445176 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| ||||| ||||| ||||| || || || |||||| Sbjct 1445177 GACACCATTGAAAATGTCAAAACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1445236 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || ||||| |||||||| | ||||| | ||| || ||| Sbjct 1445237 CAACGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCAGAACTCTTTCCGACTACAAC 1445296 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| || || || Sbjct 1445297 ATCCAAAAGGAGTCCAC 1445313 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23985 AACAAA--ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 |||||| |||||| | ||||||||||| |||||||| || | |||||| | || || | Sbjct 1444197 AACAAATCATGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTGGAGGTTG 1444256 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | | ||||| || || | ||||| ||||| ||||| ||||| || || | Sbjct 1444257 AAGGTTCTGACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGTATTCCAC 1444316 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | |||||||| | || |||| | ||| || ||| | ||||| | ||||| | | Sbjct 1444317 CTGATCAACAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGG 1444376 Query 24163 ATTATAACATTCAAAAAGAATCTAC 24187 |||| ||||||||||| ||||| || Sbjct 1444377 ATTACAACATTCAAAAGGAATCCAC 1444401 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| || | || || | ||||| |||| Sbjct 1444889 ATGCAAATCTTTGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTTGAGGGATCT 1444948 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| |||||| ||||| ||||| || || || |||||| Sbjct 1444949 GACACCATTGAGAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAA 1445008 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| | ||| || ||| | ||||| | ||||| | ||||| ||| Sbjct 1445009 CAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAAC 1445068 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 1445069 ATTCAAAAGGAATCCAC 1445085 >seq2 Length=1770755 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 23972 TACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTAC 24031 |||||| |||| ||||| |||| | || || || || ||||| ||||| | || || Sbjct 949064 TACTTTATAGC-AAACA---TGCAGATCTTCGTTAAGACTTTAACAGGAAAGACCATCAC 949009 Query 24032 CATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 24091 | ||||| || | || |||||||| | ||||| ||||| ||||| || Sbjct 949008 TCTTGAAGTTGAAGGTTCAGATACCATCGAAAACGTCAAGGCTAAGATCCAAGACAAGGA 948949 Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 ||| || || ||||||||||| | || || | | ||| |||||||||||||| | | Sbjct 948948 AGGTATCCCACCCGATCAACAACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGGTCG 948889 Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | || ||||| ||||| ||||| |||||||| Sbjct 948888 TACCCTCTCGGATTACAACATCCAAAAGGAATCTAC 948853 >seq5 Length=4166812 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||||| | || || |||||| | || || || | |||||| | || || |||| Sbjct 207382 AAATGCAGATCTTCGTTAAAACACTCACAGGTAAGACCATTACCTTAGAGGTAGAGGGTT 207441 Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 |||||| ||||| | ||||| ||||| ||||| ||||| || || || || | Sbjct 207442 CCGACACTATCGAAAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCACCTGACC 207501 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 |||| | || || | | ||| |||||||||||||| | | | | || ||| || | Sbjct 207502 AACAACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGGTCGTACCCTCTCCGACTACA 207561 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| ||||| || ||||| Sbjct 207562 ACATCCAAAAGGAGTCTAC 207580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935869003875