Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq21 143 2e-29 seq24 138 1e-27 seq5 96.9 3e-15 >seq21 Length=1919465 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||||||| || ||||||| | ||||| ||| ||| Sbjct 1444433 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCT 1444492 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| || ||| ||||| ||||| ||||||||||| ||| Sbjct 1444493 GACACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAA 1444552 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| ||||| ||||| || | ||||| | | ||| || |||||||| Sbjct 1444553 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAAC 1444612 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || ||| | || || Sbjct 1444613 ATTCAAAAGGAATCCACTCTCCATCTTGTCCT 1444644 Score = 143 bits (158), Expect = 2e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| | || ||||| ||||||| | ||||| ||| ||| Sbjct 1444889 ATGCAAATCTTTGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTTGAGGGATCT 1444948 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | || | ||| ||||| ||||| ||||||||||| || Sbjct 1444949 GACACCATTGAGAATGTCAAGACCAAGATTCAA-GACAAGGAAGGTATTCCACCTGATCA 1445007 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| |||||||| ||||| | | ||| || |||||||| Sbjct 1445008 ACAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAA 1445067 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || ||| | || || Sbjct 1445068 CATTCAAAAGGAATCCACTCTCCATCTCGTCCT 1445100 Score = 140 bits (154), Expect = 3e-28 Identities = 173/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| || |||||||| ||||||| | ||||| || || Sbjct 1352608 ATGCAAATCTTTGTAAAGACATTAACCGGTAAGACCATCACTCTTGAAGTTGAAGGATCC 1352667 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||||||| | ||| | || | ||| ||||| ||||| ||||||||||| || Sbjct 1352668 GACACTATCGAGAATGTCAAGGCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGATCA 1352726 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||| || || ||||||||||| | | ||| || ||| || || Sbjct 1352727 ACAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGAAGAACTTTGTCCGACTATAA 1352786 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||| ||||| || || ||| | || |||| || | || || || || Sbjct 1352787 CATTCAAAAGGAATCAACTCTCCATCTCGTATTAAGATTACGTGGTGGTAACTA 1352840 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||| ||||| || ||||| |||| || | || || || ||| Sbjct 1444205 ATGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTGGAGGTTGAAGGTTCT 1444264 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| || ||| ||||| ||||| ||||||||||| ||| Sbjct 1444265 GACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1444324 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | ||||||||||| |||||||| ||||| | | ||| || |||||||| Sbjct 1444325 CAACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAAC 1444384 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || ||| | || || Sbjct 1444385 ATTCAAAAGGAATCCACTCTCCATCTTGTCCT 1444416 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || ||||| ||||||| ||||||| || || Sbjct 1444661 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGTTCG 1444720 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| ||||| ||||||||||| || Sbjct 1444721 GACACCATTGAAAACGTCAAGACCAAGATTCAA-GACAAGGAAGGTATTCCACCTGATCA 1444779 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| |||||||| |||||||||||||| | | ||| | ||| ||||| Sbjct 1444780 ACAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTCTTTCCGACTACAA 1444839 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || ||||| || ||| | || || Sbjct 1444840 CATCCAAAAGGAGTCCACTCTCCATCTTGTCCT 1444872 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || |||||| | ||||| | |||||||| || Sbjct 1352380 ATGCAAATTTTCGTCAAGACCCTCACTGGTAAAACTATCACTTTGGAAGTGGAAGGATCC 1352439 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | ||| | || | ||| ||||| ||||| ||||||||||| || Sbjct 1352440 GATACCATTGAAAACGTAAAGGCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGATCA 1352498 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| |||||||||||||| | | ||| || ||| || || Sbjct 1352499 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGACGGAAGAACTTTGTCCGACTATAA 1352558 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| || || ||| | || || Sbjct 1352559 CATTCAAAAGGAATCAACTCTCCATCTCGTCCT 1352591 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || | ||||| ||||||| || || Sbjct 1352152 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACAATCACCCTCGAAGTCGAAGGATCC 1352211 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| ||||| ||||||||||| ||| Sbjct 1352212 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAA 1352271 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || |||||||||||||| | || ||| | |||||| || Sbjct 1352272 CAAAGATTAATCTTTGCAGGTAAACAATTAGAAGACGGACGTACTCTTTCCGATTATAAC 1352331 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| || || ||| | || || Sbjct 1352332 ATCCAAAAGGAATCAACTCTCCATCTCGTCCT 1352363 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||| ||| | || ||||| ||||||| | || || || ||| Sbjct 1351924 ATGCAAATTTTTGTAAAAACTCTTACTGGTAAGACCATCACCTTGGAGGTTGAAGGATCT 1351983 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | ||| | || | ||| ||||| ||||| || |||||||| || Sbjct 1351984 GATACCATTGAAAATGTAAAGGCTAAGATTCAA-GACAAGGAAGGTATCCCACCTGATCA 1352042 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||| || || ||||||||||| | ||||||| | ||| || || Sbjct 1352043 ACAACGTCTTATCTTTGCTGGAAAGCAATTAGAAGACGGTCGCACTTTATCCGACTATAA 1352102 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || || || || || || || || Sbjct 1352103 CATTCAAAAGGAGTCAACCCTTCACTTGGTCCT 1352135 Score = 109 bits (120), Expect = 5e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| || || ||||| ||||||| | ||||| ||| ||| Sbjct 1445117 ATGCAAATCTTTGTAAAGACATTAACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 1445176 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| || ||| | || ||||| ||||| ||||||||||| Sbjct 1445177 GACACCATTGAAAATGTCAA--AACCAAGA--TCCAAGACAAGGAAGGTATTCCACCTGA 1445232 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || |||| ||||| || || || | ||||| | | ||| | ||| || Sbjct 1445233 TCAACAACGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCAGAACTCTTTCCGACTA 1445292 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||| || ||||| || ||| | || || Sbjct 1445293 CAACATCCAAAAGGAGTCCACTCTCCATCTCGTCCT 1445328 >seq24 Length=3408800 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||||||| || ||||||| | ||||| || ||| Sbjct 192637 ATGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACCTTGGAAGTCGAAGGTTCT 192578 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| ||||| || |||||||| || Sbjct 192577 GACACTATCGAAAATGTCAAGACCAAGATTCAA-GACAAGGAAGGTATCCCACCTGATCA 192519 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || |||||||| |||||||||||||| | || ||| | ||||||||| Sbjct 192518 ACAACGTCTCATCTTTGCCGGTAAACAATTAGAAGACGGCCGAACTCTTTCCGATTACAA 192459 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| || || ||| | || || Sbjct 192458 CATCCAAAAGGAATCTACTCTCCATCTTGTCCT 192426 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 |||||||||||| ||||| || || || || |||||| |||| || | ||||| || Sbjct 193097 AACAATGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGAAGG 193038 Query 25055 GTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 |||||||||||||| | ||| | || | ||| ||||| ||||| || ||||||| Sbjct 193037 CTCTGACACTATCGAAAATGTCAAGACCAAGATTCAA-GACAAGGAAGGTATCCCACCTG 192979 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 | ||||| || | ||||| ||||| ||||||||||| |||| | | || | |||| Sbjct 192978 ATCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATT 192919 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || ||||| |||||||| || ||| | || || Sbjct 192918 ACAACATCCAAAAGGAATCCACTCTCCATCTCGTCCT 192882 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || ||||| ||||||| ||||||| || || Sbjct 192865 ATGCAAATTTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGATCC 192806 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| ||||| || |||||||| || Sbjct 192805 GACACTATCGAAAATGTCAAGACCAAGATTCAA-GACAAGGAAGGTATCCCACCTGATCA 192747 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| |||||||| |||||||||||||| | | ||| || || ||||| Sbjct 192746 ACAACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTTTGTCGGACTACAA 192687 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| |||||||| || ||| | || || Sbjct 192686 CATCCAAAAGGAATCCACTCTCCATCTCGTCCT 192654 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| ||||| ||||||| | ||||| || || Sbjct 192180 ATGCAGATCTTTGTCAAGACATTGACTGGTAAGACCATCACTCTTGAAGTCGAAGGATCC 192121 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| ||||| || |||||||| || Sbjct 192120 GACACCATTGAAAACGTTAAGACCAAGATTCAA-GACAAGGAAGGTATCCCACCTGATCA 192062 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| |||||||| ||||||||||| |||| | || | |||||||| Sbjct 192061 ACAACGTCTTATCTTTGCCGGTAAACAATTAGAGGATGGCAGAACCCTCTCGGATTACAA 192002 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||||||| || ||| | || || Sbjct 192001 CATTCAAAAGGAATCCACTCTCCATCTTGTCCT 191969 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || ||||| ||||||| | ||||| ||| ||| Sbjct 192409 ATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCT 192350 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAG-AAGGGATTCCACCTGACCA 25117 ||||| || || | ||| || ||| ||||| | |||| || |||||||| || Sbjct 192349 GACACCATTGAAAATGTCAAGACCAAGATCCAAGACAAGGGAAGGTATCCCACCTGATCA 192290 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||| ||||| ||||||||||| |||| | | || | |||||||| Sbjct 192289 ACAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATTACAA 192230 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| |||||||| || ||| | || || Sbjct 192229 CATCCAAAAGGAATCCACTCTCCATCTCGTCCT 192197 >seq5 Length=4166812 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || ||||| |||| || | || || ||| || Sbjct 207383 AATGCAGATCTTCGTTAAAACACTCACAGGTAAGACCATTACCTTAGAGGTAGAGGGTTC 207442 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| || ||| ||||| ||||| || ||||||||||| Sbjct 207443 CGACACTATCGAAAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCACCTGACCA 207502 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| |||||||| || ||| | ||||| | ||| || | ||| ||||| Sbjct 207503 ACAACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGGTCGTACCCTCTCCGACTACAA 207562 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || ||| | || || Sbjct 207563 CATCCAAAAGGAGTCTACTCTCCATCTCGTCCT 207595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327867970375