Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq21 100 6e-16 seq20 100 6e-16 seq10 100 6e-16 seq8 100 6e-16 seq1 100 6e-16 seq24 98.7 2e-15 seq19 98.7 2e-15 seq16 98.7 2e-15 seq2 98.7 2e-15 >seq21 Length=1919465 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 72730 AGCCTTGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 72789 Query 142563 CCCCACATCGGGC 142575 |||| ||| |||| Sbjct 72790 CCCCCCATAGGGC 72802 >seq20 Length=941765 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 526170 AGCCTTGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 526111 Query 142563 CCCCACATCGGGC 142575 |||| ||| |||| Sbjct 526110 CCCCCCATAGGGC 526098 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 295480 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 295421 Query 142569 ATCGGGC 142575 || |||| Sbjct 295420 ATAGGGC 295414 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 300098 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 300157 Query 142569 ATCGGGC 142575 || |||| Sbjct 300158 ATAGGGC 300164 >seq10 Length=499581 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 107187 AGCCTTGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 107246 Query 142563 CCCCACATCGGGC 142575 |||| ||| |||| Sbjct 107247 CCCCCCATAGGGC 107259 >seq8 Length=1908399 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 974220 AGCCTTGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 974161 Query 142563 CCCCACATCGGGC 142575 |||| ||| |||| Sbjct 974160 CCCCCCATAGGGC 974148 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 808440 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 808381 Query 142569 ATCGGGC 142575 || |||| Sbjct 808380 ATAGGGC 808374 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 1299357 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 1299298 Query 142569 ATCGGGC 142575 || |||| Sbjct 1299297 ATAGGGC 1299291 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||| ||||| | ||||||| ||||||||||||| | Sbjct 1231184 GTTAGCTCAGTCGGTAGAGCGCAAGACTTTTAATTTTGTGGTCGGGGGTTCGAGCCCCCC 1231243 Query 142569 ATCGGGC 142575 || |||| Sbjct 1231244 ATAGGGC 1231250 >seq1 Length=2485436 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 1267827 AGCCTTGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 1267886 Query 142563 CCCCACATCGGGC 142575 |||| ||| |||| Sbjct 1267887 CCCCCCATAGGGC 1267899 >seq24 Length=3408800 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 2484801 GCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAGC 2484860 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2484861 CCCCCATCGGGC 2484872 >seq19 Length=761004 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 79221 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 79280 Query 142569 ATCGGGC 142575 || |||| Sbjct 79281 ATAGGGC 79287 >seq16 Length=3468650 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 647054 GCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAGC 647113 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 647114 CCCCCATCGGGC 647125 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 2897598 GCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAGC 2897539 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2897538 CCCCCATCGGGC 2897527 >seq2 Length=1770755 Score = 98.7 bits (108), Expect = 2e-15 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | Sbjct 935367 GTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGCCCCCC 935426 Query 142569 ATCGGGC 142575 || |||| Sbjct 935427 ATAGGGC 935433 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 955425 GCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCGAGC 955366 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 955365 CCCCCATCGGGC 955354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836470771025