Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 8e-15 >seq5 Length=4166812 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 242874 ATTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTG 242933 |||||| || | ||| | ||||| ||| |||||||||| ||||||| ||||| |||||| Sbjct 871193 ATTCCCAATTAAATATACCGATATTTGGAATATGTATAAAAAGGCAGAGGCAAGCTTTTG 871252 Query 242934 GACCACCGAGGAAGTTCCTCTGAACGCA---GACGTCGTCGACTGGCGCGAGAAACTCAA 242990 ||| |||| || || | || ||| || ||| ||| ||| | ||| | || Sbjct 871253 GACAGCCGAAGAGATTGATTTG---GCAAGTGATGTCAACGAATGGGAGAATAAATTGAA 871309 Query 242991 TGACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTAT 243050 |||| | |||||||| || ||||| | | | | |||||||| | ||| |||||||| Sbjct 871310 TGACAATGAACGTCACTTTATCAAGAATGTATTGGCCTTTTTCGCTGCCTCTGATGGTAT 871369 Query 243051 TGTGATGGAAAATCT 243065 ||| | ||||| || Sbjct 871370 TGTCAACGAAAACCT 871384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879646733750