Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 196 6e-45 seq5 91.5 2e-13 seq1 89.7 6e-13 >seq3 Length=2750715 Score = 196 bits (216), Expect = 6e-45 Identities = 1132/1783 (63%), Gaps = 60/1783 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| |||| ||||||||| || | |||||| |||| Sbjct 2512114 CGGAGGTAGTACATACCAGTCTTGAGACCCTTCTTCCAGGCGTAGAAATGCATAGAGGTG 2512173 Query 113657 AACTTGG-AGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | ||| |||| | || || | ||| | || ||| ||||| || Sbjct 2512174 AGTTTGGCAAAGT-TTGGTTCGGCAATAAACACGTTGAACGACTGACTTTGGTCGATAAA 2512232 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA----TTTCCCACACAG 113771 | || | || || ||||||||||| | | | |||| | ||||| | | Sbjct 2512233 GGCACCTCTGTCGGCAGCCATATCAATGAG----TGTACGTTGACGAATCTCCCAAGCCG 2512288 Query 113772 TTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCG 113831 |||| || | || | || || |||||| | || ||||| | || |||| Sbjct 2512289 ACTTGTACAGCTCTTTGAGGTCGTCGGGGATACCTTGGACGTTTTGTACCGACCCACGG- 2512347 Query 113832 CCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT 113888 || | |||| | | |||||| || | ||| | ||||| ||||||||| Sbjct 2512348 --TTAGCAATGATTTGGTTCTTCATTTCGGGAGTCCACAAACCAAGTGCCATGAGATCCT 2512405 Query 113889 CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGG---TGCGTCTCAGATAGA 113945 | | ||||| ||||| || |||||| || || | | |||| || || | Sbjct 2512406 GGAGCAATTGCTTGTTGACGACGGTAAACTCGCCGGCCAAGACCTTGCGCG--AG-TAAA 2512462 Query 113946 TATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTG 114005 | ||| | |||||||| ||||| ||||||||||| || | || || | |||||| |||| Sbjct 2512463 TGTTGCTAGTGTATGGTTCAAAACACTCATTGTTGCCGAGAATCTGTGAGGTGGATGCTG 2512522 Query 114006 TGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGA 114065 | ||||||||||| | ||| | |||||| ||||| | || || |||| |||| Sbjct 2512523 TTGGCATGGGTGCGACGAGCAACGAGTTACGTAGACCGTGTTTGACGATACGTTGTTTGA 2512582 Query 114066 GGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATAC 114125 | ||| ||||||| | | || | | | |||||| ||||| || ||||||| Sbjct 2512583 GAGCGGCCCAGTCCCAACGGGCAGATGGTTGGACATCCCACATGTCAAATTGTAGGATAC 2512642 Query 114126 CTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG 114185 ||||||| || ||||| || |||| ||||||||||| || || ||| ||||||| Sbjct 2512643 CTTGGGAAGCGGGCGAACCTGCAAAGGTCTCGTATGGACCGTCGCGCTCGGCCAATTGAC 2512702 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 | || || |||| || | || || || || ||| || | | || Sbjct 2512703 ACGATGCGTCAAGGGAAGCATAGTAGATGGTTTCGGCAATCTCCTTGTTGAGGACGGCGG 2512762 Query 114246 C--CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 114303 | || || || ||||| | | ||| ||||| || || || | |||||| | Sbjct 2512763 CAGCTGGT--GAGTCAAATGGCATACGGAGAGCGATAAAGACGTCGGCCAAACCTTGAAT 2512820 Query 114304 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 114363 || | ||| |||| ||||| | ||| || || ||||| || || || || || Sbjct 2512821 TCCAATGCCGGTTGGACGATGACGCATGTTGGAACGACGAGCTTCTTCGACTGGGTAGAA 2512880 Query 114364 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT---GAAG 114420 ||| | || || | | | || || || || | | |||||||| || | Sbjct 2512881 ATTACGGTCAATGATCTTGTTGAGGTTACGTGTAATGATACGGGTGATTTCGGCGAGATG 2512940 Query 114421 CTTTTCGT--AATCAAA--ACTGC-GA-GTCT--CTTCA-TTGACATACTTAGGAAGGGC 114471 || | || ||| || || || || | | || | |||||| |||| || || || Sbjct 2512941 GTTATGGTCAAATGAAGCGACGGCCGATGGCGAACTACGCTTGACAAACTTTGGTAGAGC 2513000 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCC 114529 || || || || || || || | || || || | |||||||| ||||| || Sbjct 2513001 AATCGATGCAAGGTTGCAAACGGCTACTTCGTCGGCTGA--AGTGTACTGGATAATCTCG 2513058 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 ||||| | ||| || | | ||| ||||| | ||||||||| || |||||| || || Sbjct 2513059 GTACAGAGATTGGAGCATTGAATAGTGCCAAGGTTCTTTTGGTTGGACTTTTCATTGCAA 2513118 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| || |||||||| || || ||||| |||| || | || || || | Sbjct 2513119 GCGTCCTTGTAGAGGATGTATGGGGTACCAGTCTCGATTTGCGAGTCGATGATGGCAAAC 2513178 Query 114650 CAGACATCG-GCGGCTGGCACAG-TGGCGTTGGCTCGCCCCTC---CTCCTCGTACTTTG 114704 |||| || | | || | || | || |||| || || |||||| Sbjct 2513179 CAGAGGTCTTGTGCCTTGACCACCTTACG--GGCTAATCCAGGAGTCTGCTCGTAGGAAA 2513236 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 |||||| | |||| || || | || | | || || || | | ||| | Sbjct 2513237 GGTAGAGATCGCGGAACTTGTCGCCGTAGCAATCGGCCAATCCAGGAGCTTCGTTTGGAC 2513296 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 | || | ||||| | || || || ||||| | ||| ||||| || | | ||||| Sbjct 2513297 AAAACAACGACCACTCGGCATTCTGTTCGACACGTTCCATAAAGAGATCGGATACCCAGA 2513356 Query 114825 GAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 | || | ||||| || || || ||||| | || || || | || | Sbjct 2513357 GTGCGTAAAAGAGGTCACGGGCACGCATCTCTTCTTTACCGTGGTTCTTTTTAAGGTCGA 2513416 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA- 114943 ||| || | || |||| |||||| ||||| ||||| || || | | ||||| | Sbjct 2513417 GAAACTCGAAAATGTCCGAGTGCCATGGTTCGAGGTAGACAGCAAACGCACCCTTTCTCT 2513476 Query 114944 --CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | ||| | |||| ||||| | || || | ||||| || || |||||||| | | Sbjct 2513477 TGCCTCCACCTTGGTCGACATAACGGGCAGTATCGTTAAACACACGTAGCATTGGCACCA 2513536 Query 115002 TACCATCAGATTGG-CCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060 ||| | | | | || || || || || ||| || ||| | || | || Sbjct 2513537 AACCGTT-GCTAGTACCGTTGGTTCCACGGATATAGGATCGTGCGGCACGGATCTTGTGC 2513595 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 | | ||||||||||| || || | ||| || || | || || | | |||| || | Sbjct 2513596 ACGGCGATACCAATACCACCGGCACTCTTGGAAATGAGGGCACATTGCTTGAGCGTGTCA 2513655 Query 115121 TAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 || || || ||||||||||| |||| || ||| | ||||| || ||||||||||| || Sbjct 2513656 TAAATACCTTCGATCGAGTCGTCCTTCATCTGC-ACGAGGAAACAACTCGACATTTGAGG 2513714 Query 115180 C--CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 115237 | |||||| |||||||| ||||||||||| || || || | || || | ||| Sbjct 2513715 CGAGTTGGTG--CCAGCGTTAAAGAGGGTTGGGGTGGCATGCGTAAAGTAACGGTTTGAC 2513772 Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297 | | ||||| || || | | | ||| |||||| || ||||| ||||| | ||||| Sbjct 2513773 AATTGGTCGTACGTGTCAATGGCAGCGTCAATGTCGTCACCGTGGATACCAAGTGAGACA 2513832 Query 115298 CGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 115340 ||||| |||| || |||||| ||| || | ||| ||| || Sbjct 2513833 CGCATCAACAAGTGTTGGGGACGTTCGATGATCATATCATTGA 2513875 >seq5 Length=4166812 Score = 91.5 bits (100), Expect = 2e-13 Identities = 298/460 (65%), Gaps = 5/460 (1%) Strand=Plus/Minus Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTC-AGAGTTCATACCGA 125927 |||||||||||| | | | |||||||| | ||||| ||| | | |||||| || | Sbjct 872030 GAGGAGACGATCGGCACAGAATTCAATGTATTTGGACAT-TTCACGACTGTTCATGCCAA 871972 Query 125928 TGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCA 125987 |||| | || | || ||| || || |||| ||| ||| ||||| || || | Sbjct 871971 TGAGATCGACGGGCAACGAGTCAGTGACAAATTCCTTTTCACATTCGACGGCGTCACGAA 871912 Query 125988 CGATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGG 126047 ||||| | ||||| | || | | ||||| | | || |||| || Sbjct 871911 TGATGGATTCGATGGTCTTGACGTCGAGCTTATTGTTGAGCTTGTTATAGAGAAGACAGG 871852 Query 126048 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTG 126107 |||| || |||||||| |||||||| ||| | || || || ||| || |||| Sbjct 871851 CAAAGTCGCAATGGAGACCTTCGTCACGACTGATCAACTCGTTGGAAAAGGTGAGACCTG 871792 Query 126108 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTC 126167 |||||||||| |||||||| | ||| || |||| ||| || ||| ||| ||||| | Sbjct 871791 GCATGAGACCACGCTTCTTGAGCCAAAAGATCGAACAGAAACTACCACTGAAAAAGATAC 871732 Query 126168 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACC 126227 | || || || || || | | ||| || ||||| || || || || || || Sbjct 871731 CTTCAACGGCGGCAAAAGCTACCAAACGTTCGGCAAACGACTTGGAGTTGGT---AATCC 871675 Query 126228 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 126287 | ||| ||||| | || ||||||| | ||| || | || | || || | ||| | Sbjct 871674 ATCTCAAAGCCCAGTCAGCTTTTTTCTTTACACATGGAATAGTTTCAATTGCATTAAATA 871615 Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTAT 126327 | |||| ||||| ||||| ||| || || |||| || Sbjct 871614 ATACCTTTTTTTCATCTGGATTTTTAATATATGTATCAAT 871575 >seq1 Length=2485436 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 172588 TGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATC 172647 ||||||||| ||||| || | ||| | ||||||||||| || ||||||||||| ||||| Sbjct 2083949 TGGCCAGAAATAGTGAATAAAATTAATAATGAGACCCTTGATATGTGAACCATCATTATC 2084008 Query 172648 CGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTC 172686 ||| ||||||||||||| | ||||| ||||| || Sbjct 2084009 TTGATCAGTCATAATCATAATCTTTCCATAACGAAGGTC 2084047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353413327000