Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 2e-12 seq24 82.4 8e-11 >seq21 Length=1919465 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| |||||||| | || ||| | |||| || |||||||| ||||| || Sbjct 1444623 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCGAGCTGCTTGCCAGCAAAG 1444564 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || || || || || | ||| | | |||||||| ||| || |||| || Sbjct 1444563 ATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTC 1444504 Query 42138 GCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| | || || || || | |||||||| ||||| || | ||||| || Sbjct 1444503 TCGATAGTGTCAGATC-CCTCGACTTCAAGAGTGATGGTCTTGCCGGTCAATGTCTTGAC 1444445 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 1444444 AAAGATTTGCAT 1444433 Score = 86.0 bits (94), Expect = 7e-12 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| |||||||| | || ||| | |||| || | || ||||| || || Sbjct 1445079 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAA 1445020 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||| || || || || | ||| | | ||||||| | ||| | || || |||| | Sbjct 1445019 ATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGT-CTTGAATCTTGGTCTTGACATT 1444961 Query 42137 CGCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| | || || || || | |||||||| || || || || ||||||| Sbjct 1444960 CTCAATGGTGTCAGATC-CCTCAACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTA 1444902 Query 42196 CAAAGATTTGCAT 42208 ||||||||||||| Sbjct 1444901 CAAAGATTTGCAT 1444889 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || | ||||| | |||| || |||||||| ||||| || Sbjct 1445308 CTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCTTCGAGCTGCTTTCCAGCAAA 1445249 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || || || || || | ||| | | |||||||| ||| || ||||| | Sbjct 1445248 GATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGTTTTGACATT 1445189 Query 42137 CGCCACCGTGTC-GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | ||||| | || | | || || | |||||||| || || |||| ||||||| Sbjct 1445188 TTCAATGGTGTCAGATCCCT-CGACTTCAAGAGTGATGGTCTTACCAGTTAATGTCTTTA 1445130 Query 42196 CAAAGATTTGCAT 42208 ||||||||||||| Sbjct 1445129 CAAAGATTTGCAT 1445117 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| || || || | || ||| | |||| |||| ||||| ||||| || Sbjct 1352798 TCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCTAATTGCTTTCCAGCAAAG 1352739 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || || || || || || | ||| | | |||||||| ||| | || | |||| | Sbjct 1352738 ATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT-TGAATCTTGGCCTTGACATT 1352680 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || | |||||||| || || |||| |||||||| Sbjct 1352679 CTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGATGGTCTTACCGGTTAATGTCTTTAC 1352620 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 1352619 AAAGATTTGCAT 1352608 >seq24 Length=3408800 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || |||||||| | ||||| || |||| |||| || ||||| || || Sbjct 192447 TCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCTAATTGTTTACCGGCAAAG 192506 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||| || || || || | ||| | | |||||||| ||| | || || |||| | Sbjct 192507 ATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT-TGAATCTTGGTCTTGACATT 192565 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||| || || | |||||||| ||||| || | ||||| || Sbjct 192566 TTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGAC 192625 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 192626 AAAGATTTGCAT 192637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212630246000