Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq21 131 2e-25 seq2 113 5e-20 seq24 105 7e-18 >seq21 Length=1919465 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| ||||||||||||||||| | | || | ||||| Sbjct 1444644 AGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCT 1444585 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || || || || || || || ||||||||||| || ||| Sbjct 1444584 TCGAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCT 1444525 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || ||| | || ||||| | ||| | |||| Sbjct 1444524 TGGATCTTGGTCTTGACATTCTCGATAGTGTCAGATCCCTCGACTTCAAGAGTGATGGTC 1444465 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||||| || || || || |||||||| Sbjct 1444464 TTGCCGGTCAATGTCTTGACAAAGATTTGCAT 1444433 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| ||||||||||||||||| | | || | ||||| Sbjct 1444416 AGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCT 1444357 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| ||||||| || || || || || ||||| ||||| || ||| Sbjct 1444356 TCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1444297 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| | || || || | || | |||| Sbjct 1444296 TGGATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTC 1444237 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||||||||| ||||||||||| Sbjct 1444236 TTACCAGTTAAAGTTTTTACAAAAATTTGCAT 1444205 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||| ||||||||||||||||| | | || | |||| Sbjct 1445101 AAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTC 1445042 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || || |||||| ||||||| || || || || || ||||| ||||| || || Sbjct 1445041 TTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTC 1444982 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| ||| | || ||| | || ||||| | ||| | ||| Sbjct 1444981 TTGAATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGT 1444922 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | || ||||| || |||||||| Sbjct 1444921 CTTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Score = 105 bits (116), Expect = 7e-18 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || ||||||||||| || || | | ||||| ||||||| | ||| Sbjct 1352126 TGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCTTCTAATTGC 1352067 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || || || || || || || || || ||||| || ||||| || || Sbjct 1352066 TTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTTA 1352007 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||||| || | |||||| | || || || | || | |||||| || || Sbjct 1352006 GCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTCTTACCAGTA 1351947 Query 64421 AAAGTTTTTACGAAAATTTGCA--TTTTAATAATGAT 64455 | ||||||||| |||||||||| |||||||||| || Sbjct 1351946 AGAGTTTTTACAAAAATTTGCATGTTTTAATAATTAT 1351910 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || ||||| | || ||||| | || ||||| ||||||||||| || || | Sbjct 1352835 ACCACCACGTAATCTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGA 1352776 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | ||||| || ||| | || || || || || || || || Sbjct 1352775 CAAAGTTCTTCCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGG 1352716 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| ||| | || || | || || Sbjct 1352715 AATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAAC 1352656 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| ||||| || || ||||| || |||||||| Sbjct 1352655 TTCAAGAGTGATGGTCTTACCGGTTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||| ||||||||||| || || | | || | |||| Sbjct 1352592 AAGGACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTC 1352533 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || || |||||| ||||||| || || || || || ||||| ||||| || || Sbjct 1352532 TTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTC 1352473 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || |||||| || | ||||| | |||||||| | ||| | || Sbjct 1352472 TTGAATCTTGGCCTTTACGTTTTCAATGGTATCGGATCCTTCCACTTCCAAAGTGATAGT 1352413 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || |||||||||||||| Sbjct 1352412 TTTACCAGTGAGGGTCTTGACGAAAATTTGCAT 1352380 >seq2 Length=1770755 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| ||||| ||||||||||| | || ||| || ||||| Sbjct 948838 AGAACGAGATGGAGGGTAGATTCCTTTTGGATGTTGTAATCCGAGAGGGTACGACCGTCT 948897 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| |||||| | || || || || || ||||| || || ||||| || ||| Sbjct 948898 TCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCTTCCTTGTCT 948957 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||| | || ||||| | ||| | |||| Sbjct 948958 TGGATCTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACTTCAAGAGTGATGGTC 949017 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || || ||||| || ||||| || ||||| || Sbjct 949018 TTTCCTGTTAAAGTCTTAACGAAGATCTGCATGTT 949052 >seq24 Length=3408800 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||| ||||| ||||||||||| | | || || |||| Sbjct 192425 AAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTC 192484 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || || |||||| | ||||| || || || || || || || ||||| || || Sbjct 192485 TTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTC 192544 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || ||| | || ||||| | || | ||| Sbjct 192545 TTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGT 192604 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||| || || || || |||||||| Sbjct 192605 CTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 192637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| ||||| ||||||||||| | || ||| | | || Sbjct 192882 AGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCC 192941 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || ||||| ||||||| || || || || || || || ||||| || ||| Sbjct 192942 TCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 193001 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| | | || ||||| | || | ||| Sbjct 193002 TGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTACTTCCAAGGTAATGGTT 193061 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || || ||||| || || ||||||||| Sbjct 193062 TTACCTGTTAATGTTTTAACAAAGATTTGCATT 193094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644643861000