Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 194 2e-44 >seq3 Length=2750715 Score = 194 bits (214), Expect = 2e-44 Identities = 332/482 (69%), Gaps = 0/482 (0%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| ||||| || ||||| || ||| ||| || ||||| |||||||| Sbjct 2513750 GCCACCCCAACCCTCTTTAACGCTGGCACCAACTCGCCTCAAATGTCGAGTTGTTTCCTC 2513691 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || || |||| |||||| ||| || |||| |||| |||||| | ||||| | Sbjct 2513690 GTGCAGATGAAGGACGACTCGATCGAAGGTATTTATGACACGCTCAAGCAATGTGCCCTC 2513631 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || || || || || || || ||| || ||| | | |||||| | ||| Sbjct 2513630 ATTTCCAAGAGTGCCGGTGGTATTGGTATCGCCGTGCACAAGATCCGTGCCGCACGATCC 2513571 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || ||||| || ||||| || || |||||| | || || ||||| || || || ||| Sbjct 2513570 TATATCCGTGGAACCAACGGTACTAGCAACGGTTTGGTGCCAATGCTACGTGTGTTTAAC 2513511 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | || || || || ||||| ||||| || | ||| |||||| | || || ||||| Sbjct 2513510 GATACTGCCCGTTATGTCGACCAAGGTGGAGGCAAGAGAAAGGGTGCGTTTGCTGTCTAC 2513451 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 ||||| || |||||| ||||| | | || ||||||| |||||||||||| || Sbjct 2513450 CTCGAACCATGGCACTCGGACATTTTCGAGTTTCTCGACCTTAAAAAGAACCACGGTAAA 2513391 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | ||| | |||||||| ||||| |||||||| | || || |||||| || Sbjct 2513390 GAAGAGATGCGTGCCCGTGACCTCTTTTACGCACTCTGGGTATCCGATCTCTTTATGGAA 2513331 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || ||||| | || ||| ||| | |||||||| || ||| ||| ||| || || Sbjct 2513330 CGTGTCGAACAGAATGCCGAGTGGTCGTTGTTTTGTCCAAACGAAGCTCCTGGATTGGCC 2513271 Query 94372 GA 94373 || Sbjct 2513270 GA 2513269 Score = 96.9 bits (106), Expect = 3e-15 Identities = 199/295 (67%), Gaps = 6/295 (2%) Strand=Plus/Minus Query 95072 TCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGC 95131 ||||||||||| | ||| || |||| || || |||||||| || || ||||| | | Sbjct 2512567 TCAAACACGGTCTACGTAACTCGTTGCTCGTCGCACCCATGCCAACAGCATCCACCTCAC 2512508 Query 95132 AGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGG 95191 |||| || |||||||| |||| || ||||| | ||| |||| | ||| | || Sbjct 2512507 AGATTCTCGGCAACAATGAGTGTTTTGAACCATACACTAGCAACATTTACTCGCGCAAGG 2512448 Query 95192 TGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGG 95251 | | ||||| || || ||||| |||||||||| | || | ||| || | | | || | Sbjct 2512447 TCTTGGCCGGCGAGTTTACCGTCGTCAACAAGCAATTGCTCCAGGATCTCATGGCACTTG 2512388 Query 95252 GTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAAC---GGCTCCGTCCAGA 95308 || ||||| | | | | ||||||||| | | || ||| || || || || | Sbjct 2512387 GTTTGTGGACTCCCGAAATGAAGAACCAAATCAT---TGCTAACCGTGGGTCGGTACAAA 2512331 Query 95309 ACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 || ||| || || || ||| |||| | ||| |||||| | | |||||||| Sbjct 2512330 ACGTCCAAGGTATCCCCGACGACCTCAAAGAGCTGTACAAGTCGGCTTGGGAGAT 2512276 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 ||||| ||||| || |||||| | | ||||||| || ||| | ||||||||||| || Sbjct 2513153 GAGACTGGTACCCCATACATCCTCTACAAGGACGCTTGCAATGAAAAGTCCAACCAAAAG 2513094 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 |||| || || | |||| ||||| || ||||||||| || |||| ||||| | Sbjct 2513093 AACCTTGGCACTATTCAATGCTCCAATCTCTGTACCGAGATTATCCAGTACACTTCAGCC 2513034 Query 94606 GACGAGATTGCTGTGTGTAACCT 94628 ||||| | || || || ||||| Sbjct 2513033 GACGAAGTAGCCGTTTGCAACCT 2513011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723045399000