Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 5e-13 >seq21 Length=1919465 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| |||||||| || || ||| Sbjct 1352150 CCACCACGGAGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGAT 1352091 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || |||| || |||||||| |||| | || || ||||| || || Sbjct 1352090 AAAGTGCGACCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGG 1352031 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||| | | ||| | ||| || | | || || Sbjct 1352030 ATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACC 1351971 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATTTATT 127125 || | ||| | || || || || ||||||||||||||||| |||||| ||| | ||| Sbjct 1351970 TCCAAGGTGATGGTCTTACCAGTAAGAGTTTTTACAAAAATTTGCATGTTTTAATAATT 1351912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500651406000