Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq24 113 4e-20 seq21 113 4e-20 >seq24 Length=3408800 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||||||||| || ||||| Sbjct 192864 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCC 192923 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| || ||| || |||||||| || ||| | || | ||||| || || || Sbjct 192924 GAGAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGT 192983 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || |||| ||| | ||||| || || Sbjct 192984 GGGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCT 193043 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| ||||| || |||| ||||| ||||| |||||||| Sbjct 193044 ACTTCCAAGGTAATGGTTTTACCTGTTAATGTTTTAACAAAGATTTGCAT 193093 Score = 111 bits (122), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||||||||| || ||||| Sbjct 192179 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCC 192238 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| || ||| || |||||||| || ||| | || | ||||| || || || Sbjct 192239 GAGAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGT 192298 Query 45231 GGAATGCCTT-CTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 || || |||| | || ||||| || || |||| ||| | |||||| || ||| Sbjct 192299 GGGATACCTTCCCTTGTCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTC 192358 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| ||||| | || || || || || || || ||||| |||||||| Sbjct 192359 GACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || ||||| || || ||||||||||| || || ||||| | Sbjct 191954 CCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAG 192013 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| | ||| || |||||||| || || | || | ||||| || || || || Sbjct 192014 AGGGTTCTGCCATCCTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGG 192073 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG-CTTCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || ||||||| | || || | | || ||| | ||||||||| ||||| Sbjct 192074 ATACCTTCCTTGTCTTGAA-TCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGAC 192132 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| | || || || || | || || ||||| || ||||| Sbjct 192133 TTCAAGAGTGATGGTCTTACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||||||||| || || || Sbjct 192636 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCC 192695 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || |||||||| || || | || | ||||| || || || Sbjct 192696 GACAAAGTTCTGCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGT 192755 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || |||| ||| | |||||||| ||| Sbjct 192756 GGGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCG 192815 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || || || || || || || |||||||||||||| Sbjct 192816 ACTTCGAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAAATTTGCAT 192865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||||||||| || |||||| Sbjct 192408 ATACCACCACGGAGACGAAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCG 192467 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || |||||||| || || | || | ||||| || || || Sbjct 192468 GAAAGAGTTCGGCCGTCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGT 192527 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || |||| ||| | ||||| ||| ||| Sbjct 192528 GGGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCG 192587 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | || |||||||| | || || ||||| |||||||| Sbjct 192588 ACTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 192637 >seq21 Length=1919465 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || ||||||||||||||||| ||||||||| Sbjct 1352381 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTTGATTCCTTTTGGATGTTATAATCG 1352322 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || || |||||||| ||||| | || |||| ||| || || || Sbjct 1352321 GAAAGAGTACGTCCGTCTTCTAATTGTTTACCTGCAAAGATTAATCTTTGTTGATCAGGT 1352262 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || ||||| || || |||| ||| | |||||||| ||| Sbjct 1352261 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGATCCTTCG 1352202 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || ||||| || || || || ||||| |||||||| Sbjct 1352201 ACTTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1352152 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || || ||||| || |||||||||||||| || ||||| ||| | ||| | Sbjct 1352822 CTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCG 1352763 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| ||||| || | || | ||||| || || || ||||| ||||| || Sbjct 1352762 TCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTG 1352703 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | |||||||| || ||||| ||||| | Sbjct 1352702 TCTTGAATCTTGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGATG 1352643 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||| || |||||||| |||||||| Sbjct 1352642 GTCTTACCGGTTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || ||||||||||| || || ||||| Sbjct 1444434 ATACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCC 1444375 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || ||||||||||| || || | || | ||||| || || || Sbjct 1444374 GACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGT 1444315 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || ||||| || || |||| ||| | ||||| ||| || Sbjct 1444314 GGAATACCTTCCTTGTCTTGGATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCA 1444255 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || || || |||| ||||||||||||||||||||| Sbjct 1444254 ACCTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCAT 1444205 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || ||||||||||| || || ||| Sbjct 1444890 ATACCACCACGGAGACGGAGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCG 1444831 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || |||||||| || || | || | ||||| || || || Sbjct 1444830 GAAAGAGTTCTGCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGT 1444771 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || |||||||| || |||| ||| | |||||| ||| ||| Sbjct 1444770 GGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCG 1444711 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || || || || || || || ||||| |||||||| Sbjct 1444710 ACTTCGAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || ||||||||||| || || ||||| Sbjct 1445118 ATACCACCACGGAGACGAAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCC 1445059 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || ||||||||||| || || | || | ||||| || || || Sbjct 1445058 GACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGT 1444999 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || |||||||| || |||| || | |||||| || ||| Sbjct 1444998 GGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCA 1444939 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || || || || || || |||||||| |||||||| Sbjct 1444938 ACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || |||||||||||||| || ||||| ||| Sbjct 1352609 ATACCACCACGGAGACGAAGGACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCG 1352550 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || |||||||| || || | || | ||||| || || || Sbjct 1352549 GACAAAGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGT 1352490 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || |||||||| || || | ||| | ||| ||||| || Sbjct 1352489 GGAATACCTTCCTTGTCTTGAATCTTGGCCTTTACGTTTTCAATGGTATCGGATCCTTCC 1352430 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | ||||| || || || || || || ||||||||||| Sbjct 1352429 ACTTCCAAAGTGATAGTTTTACCAGTGAGGGTCTTGACGAAAATTTGCAT 1352380 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || ||||| || || || ||||||||||| || || ||| Sbjct 1445343 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 1445284 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || | || ||||| || | || | ||||| || || || ||| Sbjct 1445283 AGAGTTCTGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGA 1445224 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || ||||| ||| | |||||| || ||||||| Sbjct 1445223 ATACCTTCCTTGTCTTGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACT 1445164 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | || || || |||| || |||||||| |||||||| Sbjct 1445163 TCAAGAGTGATGGTCTTACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003058749000