Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq24 134 3e-26 seq21 134 3e-26 seq5 120 7e-22 >seq24 Length=3408800 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| || |||||||||| ||||||||| | |||||| || || ||| Sbjct 192654 AGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCT 192713 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || || ||||| ||||| ||||| || || || || || ||||| || Sbjct 192714 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 192773 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || ||||| ||||| | | ||| || || | ||||| ||| Sbjct 192774 TGAATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATGGTC 192833 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||||||||| Sbjct 192834 TTACCAGTGAGGGTCTTGACAAAAATTTG 192862 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| |||||||| || |||||||||| |||||| || | | ||| | || ||| Sbjct 192426 AGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCT 192485 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || || ||||| ||||||||||| || || || || || ||||| || Sbjct 192486 TCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 192545 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || ||||| ||||| | ||| || ||||| ||||| ||| Sbjct 192546 TGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTC 192605 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||| ||||| Sbjct 192606 TTGCCGGTCAATGTCTTGACAAAGATTTG 192634 >seq21 Length=1919465 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| |||||||| ||||||||||||| ||||||||| | | ||| || || ||| Sbjct 1444872 AGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCT 1444813 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || || ||||| ||||| ||||| || || || || ||| ||||| || Sbjct 1444812 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1444753 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| ||| | |||||| | ||| || || | ||||| ||| Sbjct 1444752 TGAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGTC 1444693 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| ||||| Sbjct 1444692 TTACCAGTGAGGGTCTTGACAAAGATTTG 1444664 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| |||||||| || |||||||| | |||||| || | |||||| || || ||| Sbjct 1444416 AGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCT 1444357 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || || ||||| || |||||||| || || || || ||| ||||| || Sbjct 1444356 TCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1444297 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || ||| | ||||| | ||| || ||||| || || ||| Sbjct 1444296 TGGATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTC 1444237 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || | |||||| ||||||||||| Sbjct 1444236 TTACCAGTTAAAGTTTTTACAAAAATTTG 1444208 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || ||||||||||| | ||| ||||| | ||||| | || ||| Sbjct 1352135 AGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCT 1352076 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | |||||||| || ||||| ||||| || || || || || ||||| || Sbjct 1352075 TCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 1352016 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || ||| | ||| || | | ||| || ||||| ||||| ||| Sbjct 1352015 TGAATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTC 1351956 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| ||||||||||| Sbjct 1351955 TTACCAGTAAGAGTTTTTACAAAAATTTG 1351927 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| ||||||||||||| ||||||||| | | ||| || || ||| Sbjct 1445328 AGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCT 1445269 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| ||||| || || || || ||| ||||| || Sbjct 1445268 TCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1445209 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | |||||| | | || || || | ||||| ||| Sbjct 1445208 TGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTC 1445149 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || | || || ||||| ||||| Sbjct 1445148 TTACCAGTTAATGTCTTTACAAAGATTTG 1445120 >seq5 Length=4166812 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| ||||||||||||| ||||||||| | | || | || ||| Sbjct 207595 AGGACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCT 207536 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| ||||| ||||| || ||||| || || ||||| || Sbjct 207535 TCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCT 207476 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | ||||| || || || || ||| Sbjct 207475 TGGATCTTAGCCTTGACGTTTTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTC 207416 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || || Sbjct 207415 TTACCTGTGAGTGTTTTAACGAAGATCTG 207387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921222376675