Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 7e-16 >seq21 Length=1919465 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || || | ||| | |||| ||| ||||| || || ||||| | | Sbjct 1444431 CCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 1444372 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | | || ||||||||||| ||| ||||||| | ||| || ||||| | || Sbjct 1444371 AAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGA 1444312 Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||||| ||||| | || || | | || || || ||||| | | ||| | Sbjct 1444311 ATACCTTCCTTGTCTTGGATCTTGGTCTTGACATTTTCAATA--GTGTCAGAACCTTCAA 1444254 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 | ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct 1444253 CCTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCATG 1444204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369494160825