Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 7e-12 >seq5 Length=4166812 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| ||||| || ||| | || || || || | |||||||| || || || | Sbjct 2987636 ATGGCGGTCAAGTCTATATGGACGGTGCCAACATGAATGCACAAGTCGGTCTCTGTCGTC 2987577 Query 155008 CATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 || |||| ||| ||||| ||||| ||||| | ||||| || || || |||||||||||| Sbjct 2987576 CAGGTGA-TATCGGTGCCGATGTCTGTCACTTGAACTTGCACAAGACCTTCTGTATTCCA 2987518 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATT 155125 ||||| ||||| ||||| || | || || || | || || |||||| |||| || Sbjct 2987517 CATGGTGGTGGTGGTCCAGGTATGGGCCCCATTTGCGTCGCCTCGCATCTCGCACCCTT 2987459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212618996000