Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq21 188 2e-42 seq24 165 2e-35 seq2 163 6e-35 seq5 159 8e-34 >seq21 Length=1919465 Score = 188 bits (208), Expect = 2e-42 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || ||||||||||| ||||| || ||||| |||| ||||||||| || ||||| Sbjct 1444869 ACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCTTCT 1444810 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || |||||||| |||||||| || || ||||| ||||| ||||||||| Sbjct 1444809 AATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 1444750 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||||||||||| ||| ||||| ||||| | ||||| Sbjct 1444749 ATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGTCTTA 1444690 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 1444689 CCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 179 bits (198), Expect = 8e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||||||||| ||||| || ||||| |||| ||||||||| || |||||| Sbjct 1445325 ACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCTTCG 1445266 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| |||||||| || || ||||| ||||| |||||||| Sbjct 1445265 AGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 1445206 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| || ||||||||||| || | || |||||||| || | ||||| Sbjct 1445205 ATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCTTA 1445146 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || ||||| || | |||||| Sbjct 1445145 CCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || |||||||| || |||||||| |||||||| | | |||||| || |||||| Sbjct 1444641 ACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCG 1444582 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| |||||||| || || ||||| ||||| |||||||| Sbjct 1444581 AGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGG 1444522 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||||| || ||||| || | || |||||||| || | ||||| Sbjct 1444521 ATCTTGGTCTTGACATTCTCGATAGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCTTG 1444462 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 1444461 CCGGTCAATGTCTTGACAAAGATTTGCAT 1444433 Score = 167 bits (184), Expect = 5e-36 Identities = 169/220 (77%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || |||||||| || |||||||| |||||||| | | |||||| || ||||| Sbjct 1444413 ACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCC 1444354 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || || || || |||||||| || || ||||| ||||| |||||||| Sbjct 1444353 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 1444294 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||| ||||| |||| ||| || || | ||||| ||||| Sbjct 1444293 ATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTCTTA 1444234 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACT 195151 || || ||||||||||| || | |||||| | |||||| Sbjct 1444233 CCAGTTAAAGTTTTTACAAAAATTTGCATGATTTGTTACT 1444194 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || || || || ||||| || || |||||||| || || |||| | |||||| || Sbjct 1352823 TCTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCC 1352764 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||| | ||||| || || |||||||| |||||||| || || ||||| ||||| || Sbjct 1352763 GTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTT 1352704 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||| || |||||| ||||| || ||||| || | ||| |||||||| || | Sbjct 1352703 GTCTTGAATCTTGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGAT 1352644 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || || ||||| || | |||||| Sbjct 1352643 GGTCTTACCGGTTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || |||||||| |||||||| | | |||||| || ||||| Sbjct 1445097 ACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCC 1445038 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || || || || |||||||| || || ||||| ||||| ||||||||| Sbjct 1445037 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 1444978 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||||||||||||| || | || |||||||| || | ||||| Sbjct 1444977 ATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGTCTTA 1444918 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || ||||| || | |||||| Sbjct 1444917 CCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| |||||||| || || |||| | ||| | || ||||| | || Sbjct 1352127 GTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCTTCTAATTG 1352068 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || |||||||| |||||||| || || || || ||||| ||||||||||| || Sbjct 1352067 CTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTT 1352008 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || |||||||| || || | ||| || || | ||| | ||||| || || Sbjct 1352007 AGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTCTTACCAGT 1351948 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||| || | |||||| Sbjct 1351947 AAGAGTTTTTACAAAAATTTGCAT 1351924 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| || || |||||||| || || |||| | |||||| || ||||| Sbjct 1352588 ACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCT 1352529 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || || || || |||||||| || || ||||| ||||| ||||||||| Sbjct 1352528 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 1352469 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| |||||||| || || | ||||||||| | || | || || Sbjct 1352468 ATCTTGGCCTTTACGTTTTCAATGGTATCGGATCCTTCCACTTCCAAAGTGATAGTTTTA 1352409 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 1352408 CCAGTGAGGGTCTTGACGAAAATTTGCAT 1352380 >seq24 Length=3408800 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || |||||||| || |||||||| |||||||| | || ||||| ||||| || Sbjct 191972 ACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAGAGGGTTCTGCCATCCTCT 192031 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || |||||||| |||||||| || || || || ||||| ||||||||| Sbjct 192032 AATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 192091 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||||||||| || | ||| |||||||| || | ||||| Sbjct 192092 ATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGTGATGGTCTTA 192151 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 192152 CCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || ||||| || || ||||| || |||||||||| |||||||| || ||||| Sbjct 192429 ACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCT 192488 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || ||||| || |||||||| || || || || ||||| ||||||||| Sbjct 192489 AATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 192548 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| |||| ||| ||||| | ||| | ||||| Sbjct 192549 ATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTCTTG 192608 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 192609 CCGGTCAATGTCTTGACAAAGATTTGCAT 192637 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || ||||| || |||||||| | || ||||| ||||| || Sbjct 192885 ACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCCTCT 192944 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| ||||| || || |||||||| || || || || ||||| ||||||||| Sbjct 192945 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 193004 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| || | ||| ||||| | ||||| || || Sbjct 193005 ATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTACTTCCAAGGTAATGGTTTTA 193064 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || ||||| || || | ||||||| Sbjct 193065 CCTGTTAATGTTTTAACAAAGATTTGCATT 193094 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || ||||| || ||||| || | | |||||| || ||||| Sbjct 192657 ACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCT 192716 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || |||||||| |||||||| || || || || ||||| ||||||||| Sbjct 192717 AATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGA 192776 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| || | ||| ||||| ||||| | ||||| Sbjct 192777 ATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATGGTCTTA 192836 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 192837 CCAGTGAGGGTCTTGACAAAAATTTGCAT 192865 Score = 132 bits (146), Expect = 1e-25 Identities = 156/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || ||||| || |||||||| | || ||||| ||||| || Sbjct 192200 ACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCCTCT 192259 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT-TTGTCTTG 195050 | || ||||| ||||| || || |||||||| || || || || ||||| |||||||| Sbjct 192260 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCCTTGTCTTG 192319 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || ||||||||||| || | || |||||||| || | ||||| Sbjct 192320 GATCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCTT 192379 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 192380 ACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 >seq2 Length=1770755 Score = 163 bits (180), Expect = 6e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || || || || || ||||| || |||||||| | || || | || ||||| Sbjct 948840 AACGAGATGGAGGGTAGATTCCTTTTGGATGTTGTAATCCGAGAGGGTACGACCGTCTTC 948899 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| |||||||| || |||||||| |||||||| || || || || ||||| |||||||| Sbjct 948900 GAGTTGCTTACCGGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCTTCCTTGTCTTG 948959 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| || |||| ||| |||||||| || | ||||| Sbjct 948960 GATCTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACTTCAAGAGTGATGGTCTT 949019 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| ||||| || ||||| | ||||| Sbjct 949020 TCCTGTTAAAGTCTTAACGAAGATCTGCAT 949049 >seq5 Length=4166812 Score = 159 bits (176), Expect = 8e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| ||||| ||||| || ||||| |||| || || | || |||||| Sbjct 207592 ACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCTTCG 207533 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || |||||||| || |||||||| ||||||||||| || || || ||||| |||||||| Sbjct 207532 AGTTGCTTACCGGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 207473 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| |||| || || || | ||||| ||||| Sbjct 207472 ATCTTAGCCTTGACGTTTTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTCTTA 207413 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| | ||||| ||||| | ||||||| Sbjct 207412 CCTGTGAGTGTTTTAACGAAGATCTGCATTT 207382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481244619175