Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5 165 1e-35 >seq5 Length=4166812 Score = 165 bits (182), Expect = 1e-35 Identities = 218/302 (72%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 ||||| ||||||| |||||||||||||| || || ||||||||||| ||||| || ||| Sbjct 871480 CTATAAGTTTCAGAATGAATATTTTCAATGGCAATTTGAAAACCATAGAAACATCTTGCT 871421 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| || |||||| || | ||| | | || | |||||| || || || |||||| Sbjct 871420 TCAGGTATTTGAACTTCAGACATGAACTTGGTGGCAAGGTTTTCGTTGACAATACCATCA 871361 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAAT 37643 || || || || || | |||| || ||||| || | |||| ||||| || Sbjct 871360 GAGGCAGCGAAAAAGGCCAATACATTCTTGATAAAGTGACGTTCATTGTCATTCAATTTA 871301 Query 37644 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCC 37703 || | ||| || || | ||| ||| ||||||| || || | |||||||| |||||| Sbjct 871300 TTCTCCCATTCGTTGACATCACTTGCCAAATCAATCTCTTCGGCTGTCCAAAAGCTTGCC 871241 Query 37704 AATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTA 37763 ||| ||||||||| |||||||||| ||| || ||||| |||| ||||||||| Sbjct 871240 TCTGCCTTTTTATACATATTCCAAATATCGGTATATTTAATTGGGAATAGAACAAATCTA 871181 Query 37764 TC 37765 || Sbjct 871180 TC 871179 Score = 116 bits (128), Expect = 4e-21 Identities = 203/295 (69%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| ||||| || ||||| | |||||| || | ||| ||||| || || |||||||| | Sbjct 871856 ACAGGCAAAGTCGCAATGGAGACCTTCGTCACGACTGATCAACTCGTTGGAAAAGGTGAG 871797 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 |||||||| | ||| | || || | |||||| || | ||| ||| || || Sbjct 871796 ACCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATCGAACAGAAACTACCACTGAAAAA 871737 Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGA 37354 ||||||||||| || ||||| ||||| | |||| | || | | | | | | Sbjct 871736 GATACCTTCAACGGCGGCAAAAGCTACCAAACGTTCGGCAAACG---ACTTGGAGTTGGT 871680 Query 37355 AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTT 37414 ||||||| | | ||| || || ||| || |||||| ||| ||||||||||| || Sbjct 871679 AATCCATCTCAAAGCCCAGTCAGCTTTTTTCTTTACACATGGAATAGTTTCAATTGCATT 871620 Query 37415 TAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTA 37469 || | | |||||||| || || | | ||||| |||||||||| ||||||| Sbjct 871619 AAATAATACCTTTTTTTCATCTGGATTTTTAATATATGTATCAATTAATAAACTA 871565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316614901000