Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 4e-12 >seq8 Length=1908399 Score = 87.8 bits (96), Expect = 4e-12 Identities = 254/389 (65%), Gaps = 9/389 (2%) Strand=Plus/Minus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 |||| || || |||||||| || || | | || || ||||| || ||||| || | | Sbjct 221741 TTGGAGAGCCTGGTGTTGGAAAGACGGCAGTGGTCGAGGGATTGGCCCAACGTATTGTTC 221682 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCAT 150521 ||| || ||||||| | |||| | || ||| || ||| | |||||||||| Sbjct 221681 GTGGGGACATTCCAGACAATTTGAATGCACGTGTCATT---TCATTGGACATGGGTGCAT 221625 Query 150522 TTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAG 150581 | | ||| ||| | |||||| | || || || ||||||||| || | |||| | | Sbjct 221624 TGATTGCCGGTGCCAAGTATAGAGGAGAGTTTGAAGAACGTTTAAAGGCGGTGCTCAAGG 221565 Query 150582 AACTAAAAGAACG---CGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGG 150638 || | || || | || | | | || || || ||||| || |||||| | ||| Sbjct 221564 AAGTCAAGGACAGCAACGGCGGTATCATCCTCTTTATCGACGAGATCCATTTGGTGTTGG 221505 Query 150639 GTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTAT 150698 ||||||| |||| | |||| | |||| |||| || | ||||| | Sbjct 221504 GTGCTGGAAAGACT---GACGGTGCCATGGACGCTGCCAATTTGCTCAAACCCATGTTGG 221448 Query 150699 CTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTG 150758 | || |||||| | ||| || ||||| || || ||| || || || || || | | Sbjct 221447 CACGTGGTGAACTGCGTTGTATTGGTGCTACGACACTCGACGAGTACCGCAAGTACGTCG 221388 Query 150759 AAAAAGATGCAGCACTACAGCGTCGTTTC 150787 |||| ||| ||||| | ||||||||||| Sbjct 221387 AAAAGGATCCAGCATTCGAGCGTCGTTTC 221359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147590032412450