Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 131 3e-25 >seq3 Length=2750715 Score = 131 bits (144), Expect = 3e-25 Identities = 765/1203 (64%), Gaps = 48/1203 (4%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||||| ||| |||||| || || | | ||| ||||| || |||||||||| ||| Sbjct 2512458 GTAAATGTTGCTAGTGTATGGTTCAAAACACTCATTGTTGCCGAGAATCTGTGAGGTGGA 2512517 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||||| |||||||| || || || | ||| | | ||||| | | |||| | | Sbjct 2512518 TGCTGTTGGCATGGGTGCGACGAGCAACGAGTTACGTAGACCGTGTTTGACGATACGTTG 2512577 Query 213068 CCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTC 213127 || | ||||||||||| | | |||| ||| | || | ||||||||| Sbjct 2512578 TTTGAGAGCGGCCCAGTCCCAACGGGCAGAT-GGT--------TGGACATCCCACATGTC 2512628 Query 213128 AAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGA-GTAGGGGCCATGCT 213186 ||| || | ||| |||| | |||| | |||| ||| ||| || || | Sbjct 2512629 AAATTGTAGGATACCTTGGGAAGCGGG-CGAACCTGCAAAGGTCTCGTATGGACCGTCGC 2512687 Query 213187 CCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCC 213246 || ||||| | || || || | |||| ||| |||||||||||||| |||||| Sbjct 2512688 GCTCGGCCAATTGACACGATGCGTCAAGGGAAGCATAGTAGATGGTTTCGGCAATCTCCT 2512747 Query 213247 TGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCA 213305 ||||||| ||| |||| || || ||||| | ||| | || || || Sbjct 2512748 TGTTGAGGACGGCGGCAGCTGGTGAGTCAAATGGCATACGGAGAGCGATA-AAGACGTCG 2512806 Query 213306 GCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTC 213364 |||| || || | || |||||| | || | || | || ||| || | |||| || Sbjct 2512807 GCCAAACCTTGAATTCCAATGCCGGTTGGACGATGACGCATGTTGGAACGACGAGCT-TC 2512865 Query 213365 CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGT 213424 || | ||||| || || | ||| ||||||||||||||||| || || | ||| Sbjct 2512866 TTCGACTGGGTAGAAATTACGGTCAATGATCTTGTTGAGGTTACGTGTAATGATACGGGT 2512925 Query 213425 GACATGGGCCAGGTACTCGTGAT----TGAAC--ACG-----TAGCCCCCGTC-CTGCAC 213472 || | ||| || | | || | |||| ||| | || | | || || Sbjct 2512926 GATTTCGGCGAGATGGTTATGGTCAAATGAAGCGACGGCCGATGGCGAACTACGCTTGAC 2512985 Query 213473 AAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTA 213532 ||||| || || || || || |||||||||||||| || || | | ||||| Sbjct 2512986 AAACTTTGGTAGAGCAATCGATGCAAGGTTGCAAACGGCTACTTCGTCGGCTGAAGTGTA 2513045 Query 213533 CTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGA 213592 || || |||||||| || || ||| |||| | || ||||| ||||||| ||||| || Sbjct 2513046 CTGGATAATCTCGGTACAGAGATTGGAGCATTGAATAGTGCCAAGGTTCTTTTGGTTGGA 2513105 Query 213593 CTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACAC 213652 |||| | ||| || ||||||||||| ||||| |||| || ||||| | || || | Sbjct 2513106 CTTTTCATTGCAAGCGTCCTTGTAGAGGATGTATGGGGTACCAGTCTCGATTTGCGAGTC 2513165 Query 213653 CAGTATCTGGC--TCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGT 213709 | | |||| |||||||| | || |||||||||||| | | | ||| || || Sbjct 2513166 GATGA--TGGCAAACCAGAGGT-CTTGTGCCTTGACCACCTTACGGGCTAATCCAGGAGT 2513222 Query 213710 AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGG 213769 |||||| |||||| ||| ||| | || ||| || | ||| ||| || Sbjct 2513223 CTGCTCGTAGGAAAGGTAGAGATCGCGGAACTTGTCGCCGTAGCAATCGGCCAATCCAGG 2513282 Query 213770 ACAGGATGCG---GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAA 213826 | | | || ||||| | | ||| || | | | | ||| | | ||| || Sbjct 2513283 A---GCTTCGTTTGGACAAAACAACGACCACTCGGCATTCTGTTCGACACGTTCCATAAA 2513339 Query 213827 CAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGA 213886 || || | ||||| || ||| || ||||| | || | | |||| || || Sbjct 2513340 GAGATCGGATACCCAGAGTGCGTAAAAGAGGTCACGGGCACGCATCTCTTCTTTACCGTG 2513399 Query 213887 GTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGC 213946 ||| || || || ||||| || || ||||||| |||||| || || | ||||| || Sbjct 2513400 GTTCTTTTTAAGGTCGAGAAACTCGAAAATGTCCGAGTGCCATGGTTCGAGGTAGACAGC 2513459 Query 213947 AAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCAT-GTTGAAGA 214002 ||| || ||| |||||| || || ||||| | || || || || ||| || | Sbjct 2513460 AAACGCACCCTTTCTCTTGCCTCCACCTTGGTCGA-CATAACGGGCAGTATCGTTAAACA 2513518 Query 214003 TGCGCAGGACGGGTACCAGCCCGTTGGACT-GT-CCGTTGGTTCCCGCTATATACGAGCC 214060 || || | || |||| |||||| || || ||||||||||| ||||| || | Sbjct 2513519 CACGTAGCATTGGCACCAAACCGTTG--CTAGTACCGTTGGTTCCACGGATATAGGATCG 2513576 Query 214061 GGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGC 214120 | ||| | | ||| || || || || || |||||||| |||||| || | ||| Sbjct 2513577 TGCGGCACGGATCTTGTGCACGGCGATACCAATACCACCGGCACTCTTGGAAATGAGGGC 2513636 Query 214121 GCA 214123 || Sbjct 2513637 ACA 2513639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532508896000