Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 111 3e-19 >seq5 Length=4166812 Score = 111 bits (122), Expect = 3e-19 Identities = 130/173 (75%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 25868 CGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGT 25927 |||||| ||| || ||||||| ||||| || || || || ||||||||||| || | || Sbjct 871693 CGTTTGCCGAACGTTTGGTAGCTTTTGCCGCCGTTGAAGGTATCTTTTTCAGTGG-TAGT 871751 Query 25928 TTGCG-GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAAC 25986 || | | ||||| ||||||||| || || |||||| || || |||||||||| Sbjct 871752 TTCTGTTCGATCTTTTGGCTCAAGAAGCGTGGTCTCATGCCAGGTCTCACCTTTTCCAAC 871811 Query 25987 GAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||| | ||||| | ||||| |||||||| | || |||||||| || ||||| Sbjct 871812 GAGTTGATCAGTCGTGACGAAGGTCTCCATTGCGACTTTGCCTGTCTTCTCTA 871864 Score = 93.3 bits (102), Expect = 8e-14 Identities = 185/266 (70%), Gaps = 15/266 (6%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACT---GGACCGCCGAAGAGATT 25530 ||||| ||| | ||||| || ||||| | | ||| || |||| |||||||||||| Sbjct 871212 GATATTTGGAATATGTATAAAAAGGC---AGAGGCAAGCTTTTGGACAGCCGAAGAGATT 871268 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTT 25587 ||| |||| | || | ||| ||| | | || || ||| || | || ||| Sbjct 871269 GATTTGGCAAGTGATGTCAACGAATGGGAGAATAAATTGAATGACAATGAACGTCACTTT 871328 Query 25588 CTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 ||||| | || ||||| || || || |||||||||||||| || ||||| || || ||| Sbjct 871329 ATCAAGAATGTATTGGCCTTTTTCGCTGCCTCTGATGGTATTGTCAACGAAAACCT-TGC 871387 Query 25648 GA-GAGATTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAG-TGTTTCTACGGTTTCCAG 25704 | | |||| ||||| | | ||| || || |||| |||||||| ||||| || Sbjct 871388 CACCAAGTTCATGTCTGAAGTTCAAATACCTGAAG--CAAGATGTTTCTATGGTTTTCAA 871445 Query 25705 ATGGCCATCGAAAATGTGCACTCTGA 25730 || ||||| |||||| | || ||||| Sbjct 871446 ATTGCCATTGAAAATATTCATTCTGA 871471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844509736000