Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 138 6e-28 >seq3 Length=2750715 Score = 138 bits (152), Expect = 6e-28 Identities = 206/290 (71%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||||| || || ||| || ||||| || || || |||||||| | ||| | Sbjct 2513290 TTTGGACAAAACAACGACCACTCGGCATTCTGTTCGACACGTTCCATAAAGAGATCGGAT 2513349 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 | ||| | ||| ||||| | || | || | ||| |||||||| ||||| |||||||| Sbjct 2513350 ACCCAGAGTGCGTAAAAGAGGTCACGGGCACGCATCTCTTCTTTACCGTGGTTCTTTTTA 2513409 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 || || | || || ||||| || |||||||||||||| | |||| |||||| ||| Sbjct 2513410 AGGTCGAGAAACTCGAAAATGTCCGAGTGCCATGGTTCGAGGTAGACAGCAAACGCACCC 2513469 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 ||||| || ||||||||||| || || || | ||||| || || || || | |||| Sbjct 2513470 TTTCTCTTGCCTCCACCTTGGTCGACATAACGGGCAGTATCGTTAAACACACGTAGCATT 2513529 Query 26129 GGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTG 26177 || || || || |||| | | ||||| || | | | || | ||||| || Sbjct 2513530 GGCACCAAACC-GTTGCTAGTACCGTTGGTTCCACGGATATAGGATCGTG 2513578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039922901875