Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5 100 3e-16 >seq5 Length=4166812 Score = 100 bits (110), Expect = 3e-16 Identities = 131/179 (73%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || |||| |||||| || || | ||| || || | || ||||| ||||| |||||| Sbjct 2987459 AAGGGTGCGAGATGCGAGGCGACGCAAATGGGGCCCATACCTGGACCACCACCACCATGT 2987518 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGG 138280 ||||||||||| ||||| || || || | ||||| ||||| ||||| ||| |||| ||| Sbjct 2987519 GGAATACAGAAGGTCTTGTGCAAGTTCAAGTGACAGACATCGGCACCGATA-TCACCTGG 2987577 Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 ||||| || |||||||| | || ||||| || | ||| || ||||| |||| Sbjct 2987578 ACGACAGAGACCGACTTGTGCATTCATGTTGGCACCGTCCATATAGACTTGACCGCCAT 2987636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998219063000