Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq21 100 2e-16 seq5 98.7 6e-16 seq24 93.3 3e-14 seq2 89.7 3e-13 >seq21 Length=1919465 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| |||||| |||||||||||||| |||| |||| | || Sbjct 1352135 AGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACCGTCT 1352076 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||||||| || ||||| || ||||| || || | || | || |||||||| Sbjct 1352075 TCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 1352016 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | | || | ||| | || || || | ||| |||||| Sbjct 1352015 TGAATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGATGGTC 1351956 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || || |||||||| || |||||| Sbjct 1351955 TTACCAGTAAGAGTTTTTACAAAAATTTGCATG 1351923 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| || ||||| ||||| || || | | | || Sbjct 1445328 AGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCT 1445269 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || ||||| || ||||| || || | || | || |||||||| Sbjct 1445268 TCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1445209 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | ||| ||||||| |||| || |||||| Sbjct 1445208 TGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTC 1445149 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||||||||||| ||||| Sbjct 1445148 TTACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| || ||||| ||||| || || | | | || Sbjct 1444872 AGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCGTCT 1444813 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||| || ||||| ||||| || ||||| || || | || | || |||||||| Sbjct 1444812 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTC- 1444754 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || |||||| | | || | || | ||||| || | ||| ||||| Sbjct 1444753 TTGAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGT 1444694 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| |||||||| ||||| Sbjct 1444693 CTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||| |||||||| || ||||| | | | | || Sbjct 1445100 AGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCT 1445041 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || ||||| || || || ||||| || || | || | || |||||||| Sbjct 1445040 TCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTC- 1444982 Query 34886 TTTATTTTTTGT-TTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | | || || ||||| || || || | ||| |||| || |||| || ||| Sbjct 1444981 TTGAATCTTGGTCTTGAC--ATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATG 1444924 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||||||||||||||| ||||| Sbjct 1444923 GTCTTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 >seq5 Length=4166812 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| ||||| || ||| | || | || || |||||||| ||||| || Sbjct 207575 CTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAA 207516 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| ||||| | || | || |||||||| | || || |||||| Sbjct 207515 GATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 207456 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || |||| || || | ||| |||||||| || ||||| || || || Sbjct 207455 TTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTCTTACCTGTGAGTGTTTTAAC 207396 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 207395 GAAGATCTGCAT 207384 >seq24 Length=3408800 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||| || ||||| || ||||| ||| | | |||| Sbjct 192197 AGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACCATCC 192256 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC-TTGTC 34884 || | ||| || |||||||| || || ||||| || || | || | || ||| ||||| Sbjct 192257 TCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCCTTGTC 192316 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | | || | ||| ||||||| |||| || ||||| Sbjct 192317 TTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGT 192376 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| |||||||| ||||| Sbjct 192377 CTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||| |||||||| || ||||| ||| | | |||| Sbjct 191969 AGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAGAGGGTTCTGCCATCC 192028 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||| || ||||| ||||| || ||||| || || | || | || |||||||| Sbjct 192029 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTC- 192087 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || || ||| | | || | || | ||||| |||| || ||||| Sbjct 192088 TTGAATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGTGATGGT 192147 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||||| |||||||||||||| Sbjct 192148 CTTACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 >seq2 Length=1770755 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| || ||||| ||| | || | || || |||||||| ||||| ||| Sbjct 948859 TCCTTTTGGATGTTGTAATCCGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAAG 948918 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || || | || | || |||||||| | || || |||||| | Sbjct 948919 ATAAGACGTTGTTGATCGGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTT 948978 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || |||| || ||||||||||| || | ||||| || Sbjct 948979 TCGATGGTATCTGAACCTTCAACTTCAAGAGTGATGGTCTTTCCTGTTAAAGTCTTAACG 949038 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 949039 AAGATCTGCATG 949050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692700765475