Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq24 141 1e-28 seq21 136 6e-27 seq2 105 1e-17 >seq24 Length=3408800 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||||||||| ||||| ||||| | || |||||| | Sbjct 193092 TGCAAATCTTTGTTAAAACATTAACAGGTAAAACCATTACCTTGGAAGTAGAAGGCTCTG 193033 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || | || || ||| || ||||| || ||||| ||||||| Sbjct 193032 ACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAAC 192973 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | |||||||| || |||||||||||||| ||| |||||| | | ||||| || | Sbjct 192972 AACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATTACAACA 192913 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 192912 TCCAAAAGGAATCCACTCTCCAT 192890 Score = 109 bits (120), Expect = 9e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || ||||| || || || || || ||| |||| || ||| || Sbjct 192179 TGCAGATCTTTGTCAAGACATTGACTGGTAAGACCATCACTCTTGAAGTCGAAGGATCCG 192120 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || | || || ||| || ||||| || ||||| ||||||| Sbjct 192119 ACACCATTGAAAACGTTAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAAC 192060 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| |||||||||||||| ||| ||||| | | ||||| || | Sbjct 192059 AACGTCTTATCTTTGCCGGTAAACAATTAGAGGATGGCAGAACCCTCTCGGATTACAACA 192000 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 191999 TTCAAAAGGAATCCACTCTCCAT 191977 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||||| || || || || || || | || || ||| | | Sbjct 192636 TGCAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACCTTGGAAGTCGAAGGTTCTG 192577 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || | || || ||| || ||||| || ||||| ||||||| Sbjct 192576 ACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAAC 192517 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| ||||| |||||||||||||| || |||| | | ||||| || | Sbjct 192516 AACGTCTCATCTTTGCCGGTAAACAATTAGAAGACGGCCGAACTCTTTCCGATTACAACA 192457 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 192456 TCCAAAAGGAATCTACTCTCCAT 192434 Score = 104 bits (114), Expect = 4e-17 Identities = 146/204 (72%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || || || || ||| |||| || || | Sbjct 192408 TGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCTG 192349 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAG-AAGGCATTCCACCCGATCAA 146150 | || ||| ||||||| || | || || ||| || | |||| || ||||| |||||| Sbjct 192348 ACACCATTGAAAATGTCAAGACCAAGATCCAAGACAAGGGAAGGTATCCCACCTGATCAA 192289 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | |||||||| || |||||||||||||| ||| |||||| | | ||||| || Sbjct 192288 CAACGTCTCATTTTCGCCGGTAAACAATTAGAGGATGGTAGAACCCTCTCGGATTACAAC 192229 Query 146211 ATACAAAAAGAATCGACTATCCAT 146234 || ||||| ||||| ||| ||||| Sbjct 192228 ATCCAAAAGGAATCCACTCTCCAT 192205 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || || || || || | || || ||| || Sbjct 192864 TGCAAATTTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGATCCG 192805 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || | || || ||| || ||||| || ||||| ||||||| Sbjct 192804 ACACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAAC 192745 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| |||||||||||||| || ||||| || | || || || | Sbjct 192744 AACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTTTGTCGGACTACAACA 192685 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 192684 TCCAAAAGGAATCCACTCTCCAT 192662 >seq21 Length=1919465 Score = 136 bits (150), Expect = 6e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || ||||||| ||||| || || || ||||| | || || ||| | | Sbjct 1444206 TGCAAATTTTTGTAAAAACTTTAACTGGTAAGACCATTACCTTGGAGGTTGAAGGTTCTG 1444265 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || | || || ||| || ||||| |||||||| ||||||| Sbjct 1444266 ACACTATTGAAAATGTCAAGACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAAC 1444325 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| ||||||||||| || || ||||| || | ||||| || | Sbjct 1444326 AACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAACA 1444385 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 1444386 TTCAAAAGGAATCCACTCTCCAT 1444408 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| || ||| | || || ||| || Sbjct 1352381 TGCAAATTTTCGTCAAGACCCTCACTGGTAAAACTATCACTTTGGAAGTGGAAGGATCCG 1352440 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| ||||| || || ||| || ||||| |||||||| ||||||| Sbjct 1352441 ATACCATTGAAAACGTAAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAAC 1352500 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| |||||||||||||| || ||||| || | || ||||| | Sbjct 1352501 AACGTCTCATTTTTGCCGGTAAACAATTAGAAGACGGAAGAACTTTGTCCGACTATAACA 1352560 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 1352561 TTCAAAAGGAATCAACTCTCCAT 1352583 Score = 109 bits (120), Expect = 9e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || | || || || || || ||| |||| || || | Sbjct 1444890 TGCAAATCTTTGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAAGTTGAGGGATCTG 1444949 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || | || || ||| || ||||| |||||||| ||||||| Sbjct 1444950 ACACCATTGAGAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAAC 1445009 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| ||||||||||| || || ||||| || | ||||| || | Sbjct 1445010 AACGTCTCATTTTTGCCGGTAAACAATTGGAAGACGGCAGAACTTTGTCGGATTACAACA 1445069 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 1445070 TTCAAAAGGAATCCACTCTCCAT 1445092 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || || ||||| || | || || ||| || Sbjct 1352153 TGCAAATCTTTGTCAAGACCCTCACTGGCAAGACAATCACCCTCGAAGTCGAAGGATCCG 1352212 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || || || ||| || ||||| |||||||| ||||||| Sbjct 1352213 ACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAAC 1352272 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || |||||||||||||||||||| || | || | | |||||||| | Sbjct 1352273 AAAGATTAATCTTTGCAGGTAAACAATTAGAAGACGGACGTACTCTTTCCGATTATAACA 1352332 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| ||||| ||| ||||| Sbjct 1352333 TCCAAAAGGAATCAACTCTCCAT 1352355 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || || || || || | || || ||| | | Sbjct 1444662 TGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGTTCGG 1444721 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || | || || ||| || ||||| |||||||| ||||||| Sbjct 1444722 ACACCATTGAAAACGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAAC 1444781 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| |||||||||||||| || ||||| | | || || || | Sbjct 1444782 AACGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTCTTTCCGACTACAACA 1444841 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| || || ||| ||||| Sbjct 1444842 TCCAAAAGGAGTCCACTCTCCAT 1444864 >seq2 Length=1770755 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || ||||||||||| || || ||| |||| || ||| | | Sbjct 949048 TGCAGATCTTCGTTAAGACTTTAACAGGAAAGACCATCACTCTTGAAGTTGAAGGTTCAG 948989 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || || ||| || ||| || ||||| || ||||||||||||| Sbjct 948988 ATACCATCGAAAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCACCCGATCAAC 948929 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| ||||| ||| | || || | | || | | ||||| || | Sbjct 948928 AACGTCTTATCTTTGCCGGTAAGCAACTCGAAGACGGTCGTACCCTCTCGGATTACAACA 948869 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || ||||| | || | || | ||||| |||| Sbjct 948868 TCCAAAAGGAATCTACCCTCCATCTCGTTCTCCGCCTTAGAGGTGGTA 948821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786166154323000