Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq24 143 2e-29 seq21 132 4e-26 seq2 123 2e-23 >seq24 Length=3408800 Score = 143 bits (158), Expect = 2e-29 Identities = 164/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||| ||||| ||||||| | ||| | | Sbjct 192878 ACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACC 192937 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || || | || | | ||| ||||| || || ||||| || || Sbjct 192938 ATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCTT 192997 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || || |||||| |||| | ||||||||| ||||||||| | || | Sbjct 192998 GTCTTG-AATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTACTTCCAAGGTAA 193056 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || ||||| ||||||||||| || |||||| Sbjct 193057 TGGTTTTACCTGTTAATGTTTTAACAAAGATTTGCATT 193094 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||||||||| ||||||| | ||| | Sbjct 191965 ACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAGAGGGTTCTGCC 192024 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || ||| | || | | ||| ||||| || || ||||| || || Sbjct 192025 ATCCTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTT 192084 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || || || || |||| | ||||| || ||| ||||||||||| | Sbjct 192085 GTCTTG-AATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGTGA 192143 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || || || ||||| |||||||| Sbjct 192144 TGGTCTTACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Score = 116 bits (128), Expect = 3e-21 Identities = 159/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||| ||||| ||||||| | ||| | | Sbjct 192193 ACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCTACC 192252 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT-T 29689 ||| || | |||||| || || | || | | ||| ||||| || || ||||| || | Sbjct 192253 ATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTCCCT 192312 Query 29690 TGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 ||||||| | | || || |||||| |||| | |||||||| || ||||||||||| Sbjct 192313 TGTCTTGGA-TCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTG 192371 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || ||||| | ||| || ||||| || ||||| Sbjct 192372 ATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 >seq21 Length=1919465 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || || ||||| ||||| ||||||||||| | || || || Sbjct 1352367 ACGGAGGACGAGATGGAGAGTTGATTCCTTTTGGATGTTATAATCGGAAAGAGTACGTCC 1352308 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| || ||| | || |||||||| ||||| || |||||||| || || Sbjct 1352307 GTCTTCTAATTGTTTACCTGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 1352248 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| |||| | |||||| || ||| ||||| || || || Sbjct 1352247 GTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGAT 1352188 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || ||||| || ||||| Sbjct 1352187 TGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1352152 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||||||||| ||||||| | || | Sbjct 1444420 ACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCC 1444361 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| || ||| | || | | ||| ||||| || |||||||| || || Sbjct 1444360 GTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTT 1444301 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| || || || |||||| |||| | |||||||||| ||| || || | || | Sbjct 1444300 GTCTTG-GATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAA 1444242 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || |||||||| ||||| ||||| || ||||| Sbjct 1444241 TGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCAT 1444205 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||||||||| ||||||| | || | Sbjct 1444648 ACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCC 1444589 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || ||||||||| | || | | ||| ||||| || ||||| || || || Sbjct 1444588 GTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTT 1444529 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| | | || || |||||| | || | ||||||||| || ||||||||||| | Sbjct 1444528 GTCTTGGA-TCTTGGTCTTGACATTCTCGATAGTGTCAGATCCCTCGACTTCAAGAGTGA 1444470 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || || || || ||||| || ||||| Sbjct 1444469 TGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 1444433 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||||||||| ||||||| | || | Sbjct 1445104 ACGAAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCC 1445045 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| || ||| | || | | ||| ||||| || |||||||| || || Sbjct 1445044 GTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTT 1444985 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || || |||||| | || | |||||||| || ||||||||||| | Sbjct 1444984 GTCTTG-AATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGA 1444926 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||| || ||||| || ||||| Sbjct 1444925 TGGTCTTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||| || ||||| ||||| || || | || || | Sbjct 1445332 ACGGAGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCC 1445273 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || || |||||| | || | | ||| ||||| || |||||||| || || Sbjct 1445272 GTCTTCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTT 1445213 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||||||| |||| | |||||||| || ||||||||||| || Sbjct 1445212 GTCTTGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGAT 1445153 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || ||||| || ||||| Sbjct 1445152 GGTCTTACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || ||||| |||||||||||||| || | | || | || || | ||| Sbjct 1352811 ATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCTAATTG 1352752 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || |||||| | || | | ||| ||||| || |||||||| || |||||||| ||| | Sbjct 1352751 CTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTG-AATCT 1352693 Query 29703 TTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | |||||| | || | |||||| || ||| ||||||||||| || || || || | Sbjct 1352692 TGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGATGGTCTTACCGG 1352633 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || ||||| || ||||| Sbjct 1352632 TTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 105 bits (116), Expect = 5e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || |||||||||||||| || | | |||||| Sbjct 1352139 ACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGATAAAGTGCGACC 1352080 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || |||||| | || | | ||| ||||| || || ||||| || || Sbjct 1352079 GTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTT 1352020 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || ||| |||| | || ||||| ||| || || | || | Sbjct 1352019 GTCTTG-AATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAACCTCCAAGGTGA 1351961 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| | ||||| ||||| || ||||| || Sbjct 1351960 TGGTCTTACCAGTAAGAGTTTTTACAAAAATTTGCATGTT 1351921 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || || ||||| |||||||||||||| || | | || | Sbjct 1352595 ACGAAGGACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCC 1352536 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| || ||| | || | | ||| ||||| || |||||||| || || Sbjct 1352535 GTCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTT 1352476 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || || |||| | || || || ||| ||||| | ||| | Sbjct 1352475 GTCTTG-AATCTTGGCCTTTACGTTTTCAATGGTATCGGATCCTTCCACTTCCAAAGTGA 1352417 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| | ||| || || || || ||||| Sbjct 1352416 TAGTTTTACCAGTGAGGGTCTTGACGAAAATTTGCAT 1352380 >seq2 Length=1770755 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || || ||||| ||||| ||||| ||||||| | ||| ||| Sbjct 948835 CGGAGAACGAGATGGAGGGTAGATTCCTTTTGGATGTTGTAATCCGAGAGGGTACGACCG 948894 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||| || || ||| | || | | ||| ||||| || || ||||| || ||| Sbjct 948895 TCTTCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCTTCCTTG 948954 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || ||||| |||| | || || ||| ||| ||||||||||| || Sbjct 948955 TCTTGGATCTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACTTCAAGAGTGATG 949014 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||||| || ||||| || |||||||| || Sbjct 949015 GTCTTTCCTGTTAAAGTCTTAACGAAGATCTGCATGTT 949052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219082628525