Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-14 >seq1 Length=2485436 Score = 93.3 bits (102), Expect = 6e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 || || || ||||| || |||||| |||| ||||| |||| ||| | ||||||||| Sbjct 2083438 ATCAAAGTGGCTCAATTCTCTGGTTATGTTGCTGAACATACTGCCTATCATCATGGTGAA 2083379 Query 172946 CAAAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACATA 173005 ||| |||| | || || | ||| | || || |||||||| |||| || ||||| Sbjct 2083378 CAATCTCTTTCTTCTACCATTGTTAAAATGGCTCAAGATTTTGTTGGTAGTAACAACATC 2083319 Query 173006 ACATTACTTGA-ACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCAGC 173064 ||||| |||| | | ||||| ||||||||| | ||| |||| ||| | ||||| || Sbjct 2083318 CCATTA-TTGACTTCTGGAGGTCAATTTGGTACTCGTCTTCAAGGTGGTGATGATTCCGC 2083260 Query 173065 CGCATCAAGGTATATTTATACTAAA 173089 || | | ||||| | ||| ||| Sbjct 2083259 TTCACCTCGTTATATATTTACAAAA 2083235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279795225000