Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq24 179 7e-40 seq21 174 3e-38 >seq24 Length=3408800 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||||||||| || || || || ||||| | Sbjct 192409 TACCACCACGGAGACGAAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGG 192468 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| |||||||||| |||||| || |||||||| || | ||||||||| || | Sbjct 192469 AAAGAGTTCGGCCGTCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTG 192528 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || |||||||| || || ||| | ||| | Sbjct 192529 GGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCGA 192588 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 192589 CTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 192637 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 191952 TACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCG 192011 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || || |||| |||||| || |||||||| || | ||||||||| || | Sbjct 192012 AGAGGGTTCTGCCATCCTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTG 192071 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || || |||||||| || || ||| | Sbjct 192072 GGATACCTTCCTTGTCTTGAATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGA 192131 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 192132 CTTCAAGAGTGATGGTCTTACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Score = 152 bits (168), Expect = 1e-31 Identities = 177/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 192865 TACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCG 192924 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||||||| || |||| |||||| || || || || || | ||||||||| || | Sbjct 192925 AGAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTG 192984 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || |||||||| || || ||| ||||| Sbjct 192985 GGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTA 193044 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTT 82820 ||||||| || || || || ||||| || || || ||||| || |||||| || | ||| Sbjct 193045 CTTCCAAGGTAATGGTTTTACCTGTTAATGTTTTAACAAAGATTTGCATTGTTTTTTTT 193103 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || || || | Sbjct 192637 TACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCG 192696 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| |||||||||| |||||| || |||||||| || | ||||||||| || | Sbjct 192697 ACAAAGTTCTGCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTG 192756 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || |||||||| || || || ||| | Sbjct 192757 GGATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCGA 192816 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||| || || | ||||| ||||| || ||||| Sbjct 192817 CTTCGAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAAATTTGCAT 192865 Score = 127 bits (140), Expect = 4e-24 Identities = 167/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 192180 TACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCG 192239 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||||||| || |||| |||||| || || || || || | ||||||||| || | Sbjct 192240 AGAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTG 192299 Query 82702 GTATTCCTTCC-TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||| || ||||| ||||| | || ||||||||||| || ||| || Sbjct 192300 GGATACCTTCCCTTGTCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTCG 192359 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | ||| || ||||| || || | ||||| ||||| || ||||| Sbjct 192360 ACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 >seq21 Length=1919465 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || || || || || || ||||| || | Sbjct 1352152 TACCACCACGGAGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGG 1352093 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | | ||||||||||| ||| |||||||||||||| || | ||||||||| || | Sbjct 1352092 ATAAAGTGCGACCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTG 1352033 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| || |||||||||||||| |||||| ||| | Sbjct 1352032 GGATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTATCAGATCCTTCAA 1351973 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || || | || |||||||| || ||||| Sbjct 1351972 CCTCCAAGGTGATGGTCTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 1351924 Score = 159 bits (176), Expect = 7e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| || || || ||||| || || | | |||| |||||||||| ||| Sbjct 1352810 TGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCTAATTGC 1352751 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||||||||| || | ||||||||| || || || |||||||| ||||||||||| Sbjct 1352750 TTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTG 1352691 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || || || || ||| ||||| | ||| || ||||| || || Sbjct 1352690 GCCTTGACATTCTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGATGGTCTTACCGGTT 1352631 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || ||||||||||| || ||||| Sbjct 1352630 AATGTCTTTACAAAGATTTGCAT 1352608 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || |||||||| | Sbjct 1352380 TACCACCACGGAGACGGAGGACGAGATGGAGAGTTGATTCCTTTTGGATGTTATAATCGG 1352321 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | |||||||||| |||||| || |||||||||| |||||||||||| || | Sbjct 1352320 AAAGAGTACGTCCGTCTTCTAATTGTTTACCTGCAAAGATTAATCTTTGTTGATCAGGTG 1352261 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| || || |||||||| || || || ||| | Sbjct 1352260 GAATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGATCCTTCGA 1352201 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || |||||||| || | ||||| ||||| || ||||| Sbjct 1352200 CTTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1352152 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || ||||| || | Sbjct 1352608 TACCACCACGGAGACGAAGGACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGG 1352549 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| |||||||||| |||||| || ||||| || || | ||||||||| || | Sbjct 1352548 ACAAAGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTG 1352489 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| || ||||| |||||||| ||||| ||| | Sbjct 1352488 GAATACCTTCCTTGTCTTGAATCTTGGCCTTTACGTTTTCAATGGTATCGGATCCTTCCA 1352429 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| || || || || || | ||||| || || || ||||| Sbjct 1352428 CTTCCAAAGTGATAGTTTTACCAGTGAGGGTCTTGACGAAAATTTGCAT 1352380 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| || || || || || || || || | Sbjct 1445345 TACCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGG 1445286 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| |||| |||||||| || || |||||||||||||| || | ||||||||| || | Sbjct 1445285 AAAGAGTTCTGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTG 1445226 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| | ||| ||||||||||| || ||| || | Sbjct 1445225 GAATACCTTCCTTGTCTTGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGA 1445166 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || ||||| || || || ||||||||||| || ||||| Sbjct 1445165 CTTCAAGAGTGATGGTCTTACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 1444433 TACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCG 1444374 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| |||||||| | |||||| || ||||| || || | ||||||||| || | Sbjct 1444373 ACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTG 1444314 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| | || ||||||||||| || ||| | ||| | Sbjct 1444313 GAATACCTTCCTTGTCTTGGATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAA 1444254 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 | ||||| || || ||||| || || || || |||||||| || ||||| ||| Sbjct 1444253 CCTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCATGATT 1444201 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 1444661 TACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCG 1444602 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| |||||||| || || || ||||||||||| || | ||||||||| || | Sbjct 1444601 ACAAAGTTCTGCCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTG 1444542 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| ||||| | || ||||| || || || ||| || | Sbjct 1444541 GAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTCTCGATAGTGTCAGATCCCTCGA 1444482 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || |||||||| ||||| ||||| ||||| || ||||| Sbjct 1444481 CTTCAAGAGTGATGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 1444433 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| || || || || || || || || | Sbjct 1444889 TACCACCACGGAGACGGAGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGG 1444830 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| |||| |||||||||| |||||| || |||||||| || | ||||||||| || | Sbjct 1444829 AAAGAGTTCTGCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTG 1444770 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || || |||||||| || || | ||| | Sbjct 1444769 GAATACCTTCCTTGTCTTGAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGA 1444710 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||| || || | ||||| ||||| || ||||| Sbjct 1444709 CTTCGAGGGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||| || || || || ||||| | Sbjct 1445117 TACCACCACGGAGACGAAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCG 1445058 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||| |||||||| | |||||| || ||||| || || | ||||||||| || | Sbjct 1445057 ACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTG 1444998 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || ||||| ||||| || ||| || | Sbjct 1444997 GAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAA 1444938 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || ||||| || || | ||||||||||| || ||||| Sbjct 1444937 CTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826885508475