Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq24 120 2e-22 seq21 111 1e-19 >seq24 Length=3408800 Score = 120 bits (132), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| | | ||| | || | ||| |||||| || ||||| ||||||||||| Sbjct 191950 GTTACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATC 192009 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||||| || | | || || |||||||| |||||||| || | ||| || ||||| | Sbjct 192010 CGAGAGGGTTCTGCCATCCTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGG 192069 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | |||||| ||||| ||| || || | ||| | || | ||||||| | || Sbjct 192070 TGGGATACCTTCCTTGTCTTGAATCTT-GGTCTTAACGTTTTCAATGGTGTCGGATCCTT 192128 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || |||| ||||| || ||||| || || || || ||||||||||||||| Sbjct 192129 CGACTTCAAGAGTGATGGTCTTACCAGTCAATGTCTTGACAAAGATCTGCATA 192181 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| |||||| || ||||| ||||||||||| || Sbjct 192866 ACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGA 192925 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || |||||||| ||||| ||||| | ||| || ||||| | || Sbjct 192926 GAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGG 192985 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| || | ||||| ||| | Sbjct 192986 GATACCTTCCTTGTCTTGAATCTT-GGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTA 193044 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 | || | || || |||||||||||||| ||||| |||||||| ||||| ||| Sbjct 193045 CTTCCAAGGTAATGGTTTTACCTGTTAATGTTTTAACAAAGATTTGCATTGTT 193097 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| ||||| || ||||| |||||||||||||| Sbjct 192410 ACCACCACGGAGACGAAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 192469 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || |||||||| |||||||| || | ||| || ||||| | || Sbjct 192470 AAGAGTTCGGCCGTCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGG 192529 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| || | ||||| ||| | Sbjct 192530 GATACCTTCCTTGTCTTGAATCTT-GGTCTTGACATTTTCGATAGTGTCAGAACCTTCGA 192588 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || || || || |||||||| |||||| Sbjct 192589 CTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCATA 192638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| |||||| || ||||| ||||||||||| || Sbjct 192181 ACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGA 192240 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || |||||||| ||||| ||||| | ||| || ||||| | || Sbjct 192241 GAGGGTTCTACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGG 192300 Query 33642 CACACCTT-CTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||| | ||||| || || || | |||| || | |||||| | || Sbjct 192301 GATACCTTCCCTTGTCTTGGATCTT-GGTCTTGACATTTTCAATGGTGTCAGATCCCTCG 192359 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| ||||| || ||||| || | || || |||||||| |||||| Sbjct 192360 ACTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCATA 192410 >seq21 Length=1919465 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| |||||| || ||||| ||||||||||| || Sbjct 1445116 ACCACCACGGAGACGAAGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGA 1445057 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| ||||||||||| ||||||||||| | ||| || ||||| | || Sbjct 1445056 CAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGG 1444997 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| || | |||||| | || | Sbjct 1444996 AATACCTTCCTTGTCTTGAATCTT-GGTCTTGACATTCTCAATGGTGTCAGATCCCTCAA 1444938 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || ||||| || | || ||||||||||| |||||| Sbjct 1444937 CTTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTACAAAGATTTGCATA 1444888 Score = 107 bits (118), Expect = 1e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| | || | ||| || | ||| ||||| || ||||| ||||| || || Sbjct 1352838 GTTACCACCACGTAATCTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTC 1352779 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| | || | | |||| || ||||| ||||| ||||| || | ||| || ||||| | Sbjct 1352778 GGACAAAGTTCTTCCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGG 1352719 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | |||||| ||||| ||| || || | ||| || | |||||| | || Sbjct 1352718 TGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGA-CATTCTCGATAGTGTCGGATCCTT 1352660 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || |||| ||||| || ||||| ||||| || ||||||||||| |||||| Sbjct 1352659 CAACTTCAAGAGTGATGGTCTTACCGGTTAATGTCTTTACAAAGATTTGCATA 1352607 Score = 107 bits (118), Expect = 1e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| | | ||| | || | ||| |||||| ||| ||||| |||||||| || Sbjct 1445347 GTTACCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTC 1445288 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| || || | |||| || | || ||||| ||||| || | ||| || ||||| | Sbjct 1445287 GGAAAGAGTTCTGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGG 1445228 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697 || | |||||| ||||| || || |||| |||| ||| |||||| | | Sbjct 1445227 TGGAATACCTTCCTTGTCTTGGATCTTG-GTTTTGACATTTTCAATGGTGTCAGATCCCT 1445169 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || |||| ||||| || ||||| ||||| || ||||||||||| |||||| Sbjct 1445168 CGACTTCAAGAGTGATGGTCTTACCAGTTAATGTCTTTACAAAGATTTGCATA 1445116 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| |||||| || ||||| ||||||||||| || Sbjct 1444432 ACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGA 1444373 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| ||||||||||| ||||||||||| | ||| || ||||| | || Sbjct 1444372 CAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGG 1444313 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || || | |||| || | ||||| ||| | Sbjct 1444312 AATACCTTCCTTGTCTTGGATCTT-GGTCTTGACATTTTCAATAGTGTCAGAACCTTCAA 1444254 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || ||||| ||||| ||||||||||| || ||||| Sbjct 1444253 CCTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCAT 1444205 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || || ||| ||||| ||||| || ||||| Sbjct 1352151 ACCACCACGGAGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAGTCGGA 1352092 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| |||| || ||||| ||||| ||||| || | ||| || ||||| | || Sbjct 1352091 TAAAGTGCGACCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGG 1352032 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | ||| ||| ||| || | ||| | Sbjct 1352031 GATACCTTCCTTGTCTTGAATCTTAGCCTTTA-CATTTTCAATGGTATCAGATCCTTCAA 1351973 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| || | ||||||||||| || ||||| Sbjct 1351972 CCTCCAAGGTGATGGTCTTACCAGTAAGAGTTTTTACAAAAATTTGCAT 1351924 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| ||||| || ||||| ||||| || ||||| Sbjct 1352607 ACCACCACGGAGACGAAGGACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGA 1352548 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | |||| || |||||||| ||||||||||| | ||| || ||||| | || Sbjct 1352547 CAAAGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGG 1352488 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | || | || | ||| ||| | ||||| Sbjct 1352487 AATACCTTCCTTGTCTTGAATCTT-GGCCTTTACGTTTTCAATGGTATCGGATCCTTCCA 1352429 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || | || || || || || |||||| Sbjct 1352428 CTTCCAAAGTGATAGTTTTACCAGTGAGGGTCTTGACGAAAATTTGCATA 1352379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703899848000