Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq21 96.9 3e-15 >seq21 Length=1919465 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| | ||| |||| |||| |||| || ||||| ||||| Sbjct 1444395 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCCAATTGTTTACCGGCAAAA 1444336 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || || || || | |||| | |||||||| |||||| ||| | | || Sbjct 1444335 ATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGTCTTGACATTT 1444276 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| ||| ||||||| || || || ||||| || |||||||| ||| Sbjct 1444275 TCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTTACA 1444216 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 1444215 AAAATTTGCAT 1444205 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/235 (68%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||| || ||||||||||| || || || | ||| | || |||||||||||||| | Sbjct 1352842 TTTAGTTACCACCACGTAATCTTAATACGAGATGGAGAGTTGATTCCTTTTGAATGTTAT 1352783 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | |||| ||| |||| |||| || | ||||| || ||||| || | || || || | Sbjct 1352782 AGTCGGACAAAGTTCTTCCGTCTTCTAATTGCTTTCCAGCAAAGATAAGACGTTGTTGAT 1352723 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681 | | |||| | |||||||| ||||| ||| | | | | | |||||| Sbjct 1352722 CAGGTGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCGATAGTGTCGGATC 1352663 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || || | ||||| || ||||| || || || || ||||| || ||||| Sbjct 1352662 CTTCAACTTCAAGAGTGATGGTCTTACCGGTTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| | ||| |||| |||| || |||||||| || ||||| Sbjct 1444623 TCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCTTCGAGCTGCTTGCCAGCAAAG 1444564 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || || || || | |||| | |||||||| |||||| ||| | | | Sbjct 1444563 ATAAGACGTTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTC 1444504 Query 35666 GCCACCGTGTC-GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | || || || || | ||||| || || || ||||| || || || Sbjct 1444503 TCGATAGTGTCAGATC-CCTCGACTTCAAGAGTGATGGTCTTGCCGGTCAATGTCTTGAC 1444445 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 1444444 AAAGATTTGCAT 1444433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793459127000