Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 1e-15 >seq21 Length=1919465 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 161577 TATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGG 161636 |||| || |||||| | || | | ||| |||||||| |||||| || ||||| || | Sbjct 194272 TATATCTTGGTAATATTAATGCTAAACGTGATTGGGGACATGCTCGTGATTATGTTGAAG 194213 Query 161637 CTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAG 161696 | |||||||| ||||||||||| || || || || | ||| |||||||| ||| || Sbjct 194212 CAATGTGGTTAATGTTACAACAAAAAGTACCCGAGGATTTTGTCATTGCCACTGGTGAAA 194153 Query 161697 AGTATTCAGTGAAGGACTTTGTAGAGGCATCTGCTGAATACTTTGGTATGAAGATTGAGT 161756 ||||||||| |||||| ||| || | || | |||| || || || ||| Sbjct 194152 CGTATTCAGTTCGTGACTTTACAGAACGTGCTTTTAAAGAAATTGGAATTAATATAAAGT 194093 Query 161757 GGCAGGGTGAAGGATTGGATGAAGTGGGT 161785 ||| || ||||| | |||||| |||| Sbjct 194092 GGCGTGGAGAAGGTATCAATGAAGAGGGT 194064 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 160963 AGCTTTAATCTCTGGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAA 161022 ||| || || |||||||||| || || |||||||| ||| | | ||| | || || | Sbjct 195175 AGCATTGATTACTGGTATAACAGGTCAAGATGGATCATATTTATCAGAATTATTATTGGA 195116 Query 161023 GAAGGGGTATGAAGTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAGAAT 161082 ||||| || || || |||||||| ||| | ||| | || || || |||||||||||||| Sbjct 195115 AAAGGGTTACGAGGTACATGGTATCATTAGAAGATCATCTTCATTCAATACAGGAAGAAT 195056 Query 161083 CGATCATATCTTCGAT 161098 || ||| | || ||| Sbjct 195055 TGAACATTTATTAGAT 195040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929371897000