Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 123 2e-23 >seq5 Length=4166812 Score = 123 bits (136), Expect = 2e-23 Identities = 207/295 (70%), Gaps = 7/295 (2%) Strand=Plus/Plus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | || |||||| ||||| || || ||| | ||||| ||||| ||| | Sbjct 871181 TAGATTTGTTCTATTCCCAATTAAATATACCGATATTTGGAATATGTATAAAAAGGCAGA 871240 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT-AGCACATTGGATTG 43814 ||| ||||||||||| ||||| |||||||| | | || | | | || ||| | Sbjct 871241 GGCAAGCTTTTGGACAGCCGAAGAGATTGATTTGGCAAGTGATGTCAACGAATGGGA--G 871298 Query 43815 CATTAA---AACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCG 43870 || || || |||| ||| || ||||| || ||||| ||||| ||||| Sbjct 871299 AATAAATTGAATGACAATGAACGTCACTTTATCAAGAATGTATTGGCCTTTTTCGCTGCC 871358 Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCA 43930 || || || ||||| ||||| | | | ||| | ||||||||| |||| Sbjct 871359 TCTGATGGTATTGTCAACGAAAACCTTGCCACCAAGTTCATGTCTGAAGTTCAAATACCT 871418 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAA 43985 |||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||| Sbjct 871419 GAAGCAAGATGTTTCTATGGTTTTCAAATTGCCATTGAAAATATTCATTCTGAAA 871473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455878900125