Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 280 2e-70 >seq3 Length=2750715 Score = 280 bits (310), Expect = 2e-70 Identities = 1081/1675 (65%), Gaps = 66/1675 (4%) Strand=Plus/Minus Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254 ||| ||||| || || || ||||| || ||||| || || ||| || || |||||||| Sbjct 2513760 CTTTACGCATGCCACCCCAACCCTCTTTAACGCTGGCACCAACTCGCCTCAAATGTCGAG 2513701 Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||||| ||| |||||||| ||| || || || || || || ||||||||| | Sbjct 2513700 TTGTTTCCTCGTGCAGATGAAGGACGACTCGATCGAAGGTATTTATGACACGCTCAAGCA 2513641 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || || | ||| |||||| | |||| ||||| || ||| | ||| | || ||||| Sbjct 2513640 ATGTGCCCTCATTTCCAAGAGTGCCGGTGGTATTGGTATCGCCGTGCAC-AAGATCCG-- 2513584 Query 19374 CGAGTGGTACACGA------ATCAATGGGACGAACGG-AGTAGCCGACGGTATCGTCCCA 19426 || ||||| ||| ||| || ||||| | |||| ||||| | || ||| Sbjct 2513583 ----TGCCGCACGATCCTATATCCGTGGAACCAACGGTACTAGCA-ACGGTTTGGTGCCA 2513529 Query 19427 ATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAG 19486 ||||| || || || ||| | || ||| | || ||| |||| || || ||||| | ||| Sbjct 2513528 ATGCTACGTGTGTTTAACGATACTGCCCGTTATGTCGACCAAGGTGGAGGCAAGAGAAAG 2513469 Query 19487 GGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTG 19546 || |||| || |||||||||| ||||||||| ||||| | | || || ||||| || Sbjct 2513468 GGTGCGTTTGCTGTCTACCTCGAACCATGGCACTCGGACATTTTCGAGTTTCTCGACCTT 2513409 Query 19547 CGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATT 19606 |||||| ||| | || |||||||| || |||||||| || | ||| | Sbjct 2513408 AAAAAGAACCACGGTAAAGAAGAGATGCGTGCCCGTGACCTCTTTTACGCACTCTGGGTA 2513349 Query 19607 CCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCAC 19666 | || || || ||||| || || || | | || ||| || | || || || Sbjct 2513348 TCCGATCTCTTTATGGAACGTGTCGAACAGAATGCCGAGTGGTCGTTGTTTTGTCCAAAC 2513289 Query 19667 GAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGACTTAC 19726 ||| ||||| | |||| ||||||||| |||| || | |||| | ||| Sbjct 2513288 GAAGCTCCTGGATTGGCCGATTGCTACGGCGACAAGTTCCGCGATCTCTACCTTTCCTAC 2513229 Query 19727 GTAGCCCAGGGCCGGTTCAAG----AAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGT 19782 | ||| | | || | | ||||||||| ||| | ||| ||||| | | Sbjct 2513228 G-AGCAGACTCCTGGATTAGCCCGTAAGGTGGTCAAGGCACAAGACCTCTGGTTTGCCAT 2513170 Query 19783 CCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGC 19842 | || | || ||||||| || || || ||||| |||||||||||| || | Sbjct 2513169 CATCGACTCGCAAATCGAGACTGGTACCCCATACATCCTCTACAAGGACGCTTGCAATGA 2513110 Query 19843 CAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCAT 19902 ||||| || || |||||| | ||| | || | | ||||| || ||||| || || || Sbjct 2513109 AAAGTCCAACCAAAAGAACCTTGGCACTATTCAATGCTCCAATCTCTGTACCGAGATTAT 2513050 Query 19903 GGAGGT---TTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGC-CTGC 19958 || ||| ||||| |||| ||||| || || || || || | ||| || | Sbjct 2513049 CCAGTACACTTC--AGCCG-ACGAAGTAGCCGTTTGCAACCTTGCATCGAT-TGCTCTAC 2512994 Query 19959 CGACTTTCGTCAAG--------GCC-TCCTCCTTCGACT---TTGCCAA-----AT-TGT 20000 | | || |||||| ||| || || ||| | ||| | | || | Sbjct 2512993 CAAAGTTTGTCAAGCGTAGTTCGCCATCGGCCGTCGCTTCATTTGACCATAACCATCTCG 2512934 Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060 ||| | ||||| || | || ||||| || || |||| || || || || |||| Sbjct 2512933 CCGAAATCACCCGTATCATTACACGTAACCTCAACAAGATCATTGACCGTAATTTCTACC 2512874 Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120 | ||| | || || || || ||||| || || || | || || || | || | Sbjct 2512873 CAGTCGAAGAAGCTCGTCGTTCCAACATGCGTCATCGTCCAACCGGCATTGGAATTCAAG 2512814 Query 20121 GCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCG--CGA 20178 | |||||||||| || || ||| | | |||| ||| || | || || || Sbjct 2512813 GTTTGGCCGACGTCTTTATCGCTCTCCGTATGCCATTTGAC--TCACCAGCTGCCGCCGT 2512756 Query 20179 GCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACT 20238 |||||||||| || ||| || | ||| | || |||| | |||||| || | Sbjct 2512755 CCTCAACAAGGAGATTGCCGAAACCATCTACTATGCTTCCCTTGACGCATCGTGTCAATT 2512696 Query 20239 CGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCT 20298 ||| | ||||| || |||||||| || || |||||||| ||| | |||||||| Sbjct 2512695 GGCCGAGCGCGACGGTCCATACGAGACCTTTGCAGGTTCGCCCGCTTCCCAAGGTATCCT 2512636 Query 20299 CCAGCCGGACATGTGGGGCGTCA------CTGAGAATGAGTTTTGGAGCGCCCTCAAGGT 20352 || |||||||||| ||| ||| | | ||| ||| ||||| Sbjct 2512635 ACAATTTGACATGTGGGATGTCCAACCATCTGCCCGTTGGGACTGGGCCGCTCTCAAACA 2512576 Query 20353 TGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTC 20412 ||| | ||||| || || ||||||||||||||||| |||||||| || || || Sbjct 2512575 ACGTATCGTCAAACACGGTCTACGTAACTCGTTGCTCGTCGCACCCATGCCAACAGCATC 2512516 Query 20413 GACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTT 20472 ||| | ||||| | || ||||| ||| ||| || || ||||| | |||||| |||| Sbjct 2512515 CACCTCACAGATTCTCGGCAACAATGAGTGTTTTGAACCATACACTAGCAACATTTACTC 2512456 Query 20473 GCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCA 20532 ||| ||||||| ||||| | | || |||||||| || ||| || | Sbjct 2512455 GCGCAAGGTCTTGGCCGGCGAGTTTACCGTCGTCAACAAGCAATTGCTCCAGGATCTCAT 2512396 Query 20533 GAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT-TGTCCGAGCCGGCGGGAGCG 20591 | | | | ||||| | ||| |||| ||||| |||| | | | || | ||| | Sbjct 2512395 GGCACTTGGTTTGTGGACTCCCGAAATGAAGAACCAAATCATTGCTAACC-GTGGGTCGG 2512337 Query 20592 TCCA----GGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAA 20647 | || | | || ||||||| | ||||||| || | |||| | | | ||||| Sbjct 2512336 TACAAAACGTCCAAGG-TATCCCCGACGACCTCAAAGAGCTGTACAAGTCGGCTTGGGAG 2512278 Query 20648 ATCCCACAGAAGAGCA-TCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTC 20706 || | || | | || |||| || ||||| ||||| | || |||| |||||||| Sbjct 2512277 ATTCGTCA-ACGTACACTCATTGATATGGCTGCCGACAGAGGTGCCTTTATCGACCAAAG 2512219 Query 20707 CCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATAT 20766 |||||| |||| || || || | | || | | | || || || | ||| |||||| | Sbjct 2512218 TCAGTCGTTCAACGTGTTTATTGCCGAACCAAACTTTGCCAAACTCACCTCTATGCATTT 2512159 Query 20767 GTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACCCGAGCC 20821 |||| |||| | ||||| |||||||| || |||||||| || || || || ||| Sbjct 2512158 CTACGCCTGGAAGAAGGGTCTCAAGACTGGTATGTACTACCTCCGTACTCGTGCC 2512104 Score = 279 bits (308), Expect = 6e-70 Identities = 1140/1764 (65%), Gaps = 60/1764 (3%) Strand=Plus/Plus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 ||| || || || | |||||||| || |||||||||||||||||||| |||| | || Sbjct 2512104 GGCACGAGTACGGAGGTAGTACATACCAGTCTTGAGACCCTTCTTCCAGGCGTAGAAATG 2512163 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCA-TGAAGATGTTGAGCGACTGGGACT 78301 |||| | || ||||| | | | ||||| || | || | ||||| |||||| | Sbjct 2512164 CATAGAGGTGAGTTTGGCAA-AGTTTGGTTCGGCAATAAACACGTTGAACGACTGACTTT 2512222 Query 78302 GGTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCC 78361 ||||||| | ||||| | |||||| ||||| || |||| | ||| ||||||||| Sbjct 2512223 GGTCGATAAAGGCACCTCTGTCGGCAGCCATATCAATGAGTGTACGTTGACGAATCTCCC 2512282 Query 78362 AGATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGC---TTGTACGCTCC 78418 | | | ||| | | || || || || |||| | | | |||||| || Sbjct 2512283 AAGCCGACTTGTACAGCTCTTTGAGGTCGTCGGGGATACCTTGGACGTTTTGTACCGACC 2512342 Query 78419 CACCGGCTCGCACA-ATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTC--TGAA 78475 ||| || | ||| |||| ||||| |||| || |||| | | | | | ||| Sbjct 2512343 CAC-GGTTAGCAATGATTTGGTTCTTCATTTCGGGAGTCCA-CAAACCAAGTGCCATGA- 2512399 Query 78476 GATCCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGT 78535 ||||| ||| || ||| ||| | | | ||||||||||||| | | |||| || Sbjct 2512400 GATCCTGGAGCAATTGCTTGTTGACGACGGTAAACTCGCCGGCCAAGACCTTGCGCGAGT 2512459 Query 78536 AGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGG 78595 | |||||| | ||||| || || ||| ||| ||||| || | ||||| | ||| || | Sbjct 2512460 AAATGTTGCTAGTGTATGGTTCAAAACACTCATTGTTGCCGAGAATCTGTGAGGTGGATG 2512519 Query 78596 CGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCT 78655 | || |||||||||||||| || | || || || ||||| || | ||| || | Sbjct 2512520 CTGTTGGCATGGGTGCGACGAGCAACGAGTTACGTAGACCGTGTTTGACGATA-CGTTGT 2512578 Query 78656 TTA-----GGCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGG 78708 || |||| ||||||| || | || |||||||||| ||| ||| Sbjct 2512579 TTGAGAGCGGCCCAGTCCCAACGGGCAGATGGTTGGACATCCCACATGTCAAATTGTAGG 2512638 Query 78709 ATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768 ||||| | ||| || ||||| || || |||||||| | || || || ||| | | Sbjct 2512639 ATACCTTGGGAAGCGGGCGAACCTGCAAAGGTCTCGTATGGACCGTCGCGCTCGGCCAAT 2512698 Query 78769 TCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 | || || || |||| || | ||| | | ||| || |||||||||| || Sbjct 2512699 TGACACGATGCGTCAAGGGAAGCATAGTAGATGGTTTCGGCAATCTCCTTGTTGAGGACG 2512758 Query 78829 CGCGCCT--TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCT 78886 ||| | |||| ||| || | | | ||| || ||||| ||||||| || | Sbjct 2512759 -GCGGCAGCTGGTGA-GTCAAATGGCATACGGAGAGCGATAAAGACGTCGGCCAAACCTT 2512816 Query 78887 GGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGT 78946 | | || || || | || || || ||||||||| || || | ||| |||| Sbjct 2512817 GAATTCCAATGCCGGTTGGACGATGACGCATGTTGGAACGACGAGCTTCTTCGACTGGGT 2512876 Query 78947 AAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACA 79006 | || || || || |||| ||| |||||||| || | || || || | ||| | Sbjct 2512877 AGAAATTACGGTCAATGATCTTGTTGAGGTTACGTGTAATGATACGGGTGATTTCGGCGA 2512936 Query 79007 ATT-----TGGCGAAATCAAA---------ATG----ATTTCCTTTGATGAAAGTCGGTA 79048 | ||| |||| || ||| | | | |||| || | |||| Sbjct 2512937 GATGGTTATGGTCAAATGAAGCGACGGCCGATGGCGAACTACGCTTGACAAACTTTGGTA 2512996 Query 79049 G-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCT--AGAAACCTCGATGA 79105 | ||| | |||||| |||||||| ||||| ||||| |||| || || ||| | Sbjct 2512997 GAGCA-ATCGATGCAAGGTTGCAAACGGCTACTTCGTC--GGCTGAAGTGTACTGGATAA 2513053 Query 79106 TTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGT 79165 | || || || | ||| || | | || ||||| | |||||| |||||| ||| || | Sbjct 2513054 TCTCGGTACAGAGATTGGAGCATTGAATAGTGCCAAGGTTCTTTTGGTTGGACTTTTCAT 2513113 Query 79166 TACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGC 79225 | || |||||||||||| ||||| || || || ||||| | || | || | | Sbjct 2513114 TGCAAGCGTCCTTGTAGAGGATGTATGGGGTACCAGTCTCGATTTGCGAGTCGATGATGG 2513173 Query 79226 CGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTG--TA--CCGACCCTGTGCGACGTAC 79281 | ||||| ||| | ||| ||| ||||| | || || | ||| |||| Sbjct 2513174 CAAACCAGAGGTCTTGTGCCTTGACCACCTTACGGGCTAATCCAGGAGTCTGCT-CGTAG 2513232 Query 79282 GTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGC 79341 | |||| | ||| ||| || || ||| ||||| || || || |||| Sbjct 2513233 GAAAGGTAGAGATCGCGGAACTTGTCGCCGTAGCAATCGGCCAATCCAGGAGCTTCGTTT 2513292 Query 79342 GGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATC 79401 || || | || ||| || | | || || || ||||| ||||| || | | | Sbjct 2513293 GGACAAAACAACGACCACTCGGCATTCTGTTCGACACGTTCCATAAAGAGATCGGATACC 2513352 Query 79402 CACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGC 79461 || || || |||||||| ||| ||||||||| || | || |||||| || Sbjct 2513353 CAGAGTGCGTAAAAGAGGTCACGGGCACGCATCTCTTCTTTACCGTGGTTCTTTTTAAGG 2513412 Query 79462 TCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTG 79521 |||||||| || | ||||| | |||||| || || || |||| || |||| |||||| Sbjct 2513413 TCGAGAAACTCGAAAATGTCCGAGTGCCATGGTTCGAGGTAGACAGCAAACGCACCCTTT 2513472 Query 79522 CGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGC 79581 | |||||| || || |||| ||| || ||||| || | ||| || || || ||||| ||| Sbjct 2513473 CTCTTGCCTCCACCTTGGTCGACATAACGGGCAGTATCGTTAAACACACGTAGCATTGGC 2513532 Query 79582 ACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCC-CGAATGTT 79640 || | |||| | ||||| || || ||| | | || || | || || || Sbjct 2513533 ACCAAACCGTTGCTAGTACCGTTGGTTCCACGGATATAGG-ATCGTGCGGCACGGATCTT 2513591 Query 79641 CGAGCAGTG-GATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699 | ||| | ||| || || || |||| | |||||| ||| | || || | |||||||| Sbjct 2513592 -GTGCACGGCGATACCAATACCACCGGCACTCTTGGAAATGAGGGCACATTGCTTGAGCG 2513650 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | || || || || |||||||||||||||||||| || ||||| || |||||||| | Sbjct 2513651 TGTCATAAATACCTTCGATCGAGTCGTCCTTCATCTGCACGAGGAAACAACTCGACATTT 2513710 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG-AACTTTTGG 79818 | || ||| || || ||||| |||||||| || || || ||||| ||| ||| || | Sbjct 2513711 GAGGCGAGTTGGTGCCAGCGTTAAAGAGGGTTGGGGTGGCATGCGTAAAGTAACGGTTTG 2513770 Query 79819 CTCATCAGATCGTACGTCTCCTTGAC-GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGC 79877 || | |||||||| || || | ||| | |||||| |||||||| || | | Sbjct 2513771 -ACAATTGGTCGTACGTGTCAATGGCAGCG-TCAATGTCGTCACCGTGGATACCAAGTGA 2513828 Query 79878 GACGCGCATGAAGAGGTACTGGGG 79901 ||| ||||| || | || ||||| Sbjct 2513829 GACACGCATCAACAAGTGTTGGGG 2513852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524628586000